logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: RVD81018.1

You are here: Home > Sequence: RVD81018.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Arthrobotrys flagrans
Lineage Ascomycota; Orbiliomycetes; ; Orbiliaceae; Arthrobotrys; Arthrobotrys flagrans
CAZyme ID RVD81018.1
CAZy Family AA7
CAZyme Description Pectinesterase [Source:UniProtKB/TrEMBL;Acc:A0A436ZQ34]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
348 SAEB01000012|CGC8 37819.67 7.2975
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AflagransCBSH-5679 9927 N/A 30 9897
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in RVD81018.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 80 343 4.6e-49 0.7916666666666666

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395871 Pectinesterase 7.86e-24 82 343 11 241
Pectinesterase.
178372 PLN02773 8.57e-22 83 343 17 245
pectinesterase
215367 PLN02682 3.07e-19 83 343 82 310
pectinesterase family protein
178051 PLN02432 1.73e-18 83 343 23 235
putative pectinesterase
215170 PLN02301 2.02e-18 83 343 248 477
pectinesterase/pectinesterase inhibitor

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.50e-243 1 343 1 341
4.67e-119 47 343 26 331
6.00e-119 21 343 15 325
7.97e-119 48 343 30 321
1.05e-118 42 343 21 315

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.47e-17 82 343 18 244
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
2.01e-17 82 343 18 244
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
1.87e-14 77 348 12 285
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
8.95e-11 69 343 5 248
Pectin methylesterase from Carrot [Daucus carota]
5.52e-08 83 343 15 244
Chain A, Pectinesterase 1 [Solanum lycopersicum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.65e-17 82 343 46 272
Probable pectinesterase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pmeA PE=3 SV=1
3.47e-16 49 343 18 269
Probable pectinesterase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pmeA PE=3 SV=1
3.47e-16 49 343 18 269
Probable pectinesterase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pmeA PE=3 SV=1
8.72e-16 83 343 44 269
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1
1.20e-15 82 343 44 270
Pectinesterase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pmeA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000228 0.999761 CS pos: 21-22. Pr: 0.9812

TMHMM  Annotations      help

There is no transmembrane helices in RVD81018.1.