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CAZyme Information: RVD81017.1

You are here: Home > Sequence: RVD81017.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Arthrobotrys flagrans
Lineage Ascomycota; Orbiliomycetes; ; Orbiliaceae; Arthrobotrys; Arthrobotrys flagrans
CAZyme ID RVD81017.1
CAZy Family AA7
CAZyme Description Pectinesterase [Source:UniProtKB/TrEMBL;Acc:A0A436ZQ34]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
423 46420.29 5.9492
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AflagransCBSH-5679 9927 N/A 30 9897
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in RVD81017.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 80 378 1.3e-55 0.9097222222222222

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395871 Pectinesterase 4.39e-31 82 372 11 271
Pectinesterase.
178372 PLN02773 2.33e-25 83 397 17 290
pectinesterase
215280 PLN02506 8.19e-24 83 372 244 494
putative pectinesterase/pectinesterase inhibitor
215367 PLN02682 4.55e-23 83 397 82 355
pectinesterase family protein
178051 PLN02432 1.16e-22 83 372 23 265
putative pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.19e-305 1 423 1 421
6.66e-135 48 423 30 402
3.70e-131 42 419 21 388
1.36e-130 47 418 26 402
1.38e-128 62 417 37 386

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.01e-18 82 372 18 271
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1.37e-18 82 372 18 271
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
8.22e-15 69 374 5 280
Pectin methylesterase from Carrot [Daucus carota]
2.46e-14 77 339 12 276
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
1.35e-10 83 366 15 268
Chain A, Pectinesterase 1 [Solanum lycopersicum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.47e-19 57 372 233 501
Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana OX=3702 GN=PME22 PE=3 SV=1
4.07e-18 82 372 46 299
Probable pectinesterase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pmeA PE=3 SV=1
1.33e-17 83 386 44 310
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1
3.30e-17 82 386 43 310
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
3.30e-17 82 386 43 310
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000228 0.999761 CS pos: 21-22. Pr: 0.9812

TMHMM  Annotations      help

There is no transmembrane helices in RVD81017.1.