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CAZyme Information: RQM18623.1

You are here: Home > Sequence: RQM18623.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Peronospora effusa
Lineage Oomycota; NA; ; Peronosporaceae; Peronospora; Peronospora effusa
CAZyme ID RQM18623.1
CAZy Family GT71
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
480 51461.39 7.0070
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PeffusaR13 8603 N/A 0 8603
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in RQM18623.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH6 44 294 3.9e-48 0.9251700680272109

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
396075 Glyco_hydro_6 2.12e-38 44 294 2 288
Glycosyl hydrolases family 6.
227616 CelA1 1.89e-15 32 313 127 402
Cellulase/cellobiase CelA1 [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 480 1 480
1.66e-92 15 364 11 353
6.40e-73 26 334 21 331
9.68e-69 49 325 43 301
4.68e-68 33 321 29 300

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.36e-23 88 317 68 314
GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],5JX5_B GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],5JX5_C GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],5JX5_D GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_A GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_B GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_C GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_D GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102]
2.62e-21 60 295 40 270
CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF A THERMOPHILIC ENDOCELLULASE [Thermobifida fusca],2BOD_X Catalytic domain of endo-1,4-glucanase Cel6A from Thermobifida fusca in complex with methyl cellobiosyl-4-thio-beta-cellobioside [Thermobifida fusca]
1.46e-20 91 317 79 349
Crystal structure of a fungal chimeric cellobiohydrolase Cel6A [Humicola insolens]
4.15e-20 60 295 40 270
Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca [Thermobifida fusca],2BOF_X Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca in complex with cellotetrose [Thermobifida fusca],2BOG_X Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca in complex with methyl cellobiosyl-4-thio-beta- cellobioside [Thermobifida fusca]
2.17e-19 91 317 79 349
Crystal structure of a fungal chimeric cellobiohydrolase Cel6A [Humicola insolens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.15e-22 61 291 75 301
Endoglucanase A OS=Thermobispora bispora OX=2006 GN=celA PE=3 SV=1
3.64e-20 90 313 238 439
Endoglucanase A OS=Cellulomonas fimi OX=1708 GN=cenA PE=1 SV=1
3.89e-20 91 317 181 451
Probable 1,4-beta-D-glucan cellobiohydrolase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=cbhC PE=3 SV=1
4.53e-20 39 317 112 430
Exoglucanase 3 OS=Agaricus bisporus OX=5341 GN=cel3 PE=1 SV=1
8.35e-20 60 295 71 301
Endoglucanase E-2 OS=Thermobifida fusca OX=2021 GN=celB PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000234 0.999734 CS pos: 25-26. Pr: 0.9780

TMHMM  Annotations      download full data without filtering help

Start End
419 441