logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: RQM14999.1

You are here: Home > Sequence: RQM14999.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Peronospora effusa
Lineage Oomycota; NA; ; Peronosporaceae; Peronospora; Peronospora effusa
CAZyme ID RQM14999.1
CAZy Family GH72
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
385 QKXF01000176|CGC1 44447.47 5.4821
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PeffusaR13 8603 N/A 0 8603
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.-:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT60 62 362 2.3e-72 0.9848484848484849

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
371506 GlcNAc 1.60e-56 64 362 6 349
Glycosyltransferase (GlcNAc). GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1, a ubiquitous eukaryotic protein, in the cytoplasm.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.19e-293 1 385 1 385
1.13e-143 3 385 27 412
5.75e-50 56 385 113 458
1.91e-42 25 385 50 403
2.21e-39 17 385 21 397

PDB Hits      help

RQM14999.1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.41e-15 55 310 1 255
[Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase OS=Dictyostelium discoideum OX=44689 GN=gnt1 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.771728 0.228277

TMHMM  Annotations      help

There is no transmembrane helices in RQM14999.1.