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CAZyme Information: RQM13902.1

You are here: Home > Sequence: RQM13902.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Peronospora effusa
Lineage Oomycota; NA; ; Peronosporaceae; Peronospora; Peronospora effusa
CAZyme ID RQM13902.1
CAZy Family GH5|CBM43
CAZyme Description Ricin B-type lectin domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A425CA38]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
443 49814.10 5.3176
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PeffusaR13 8603 N/A 0 8603
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in RQM13902.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH17 45 299 1.7e-20 0.9453376205787781

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227625 Scw11 4.77e-41 42 297 54 305
Exo-beta-1,3-glucanase, GH17 family [Carbohydrate transport and metabolism].
395527 Ricin_B_lectin 3.26e-15 315 435 4 126
Ricin-type beta-trefoil lectin domain.
395527 Ricin_B_lectin 6.18e-13 357 437 4 84
Ricin-type beta-trefoil lectin domain.
238092 RICIN 5.03e-12 347 435 36 122
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.
366033 Glyco_hydro_17 2.22e-10 29 300 2 304
Glycosyl hydrolases family 17.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.38e-286 1 391 1 391
6.61e-230 1 391 1 391
6.61e-230 1 391 1 391
6.61e-230 1 391 1 391
6.61e-230 1 391 1 391

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.97e-32 17 292 19 281
Crystal structure of glycoside hydrolase family 17 beta-1,3-glucanosyltransferase from Rhizomucor miehei [Rhizomucor miehei CAU432]
5.57e-31 17 292 19 281
Active-site mutant of Rhizomucor miehei beta-1,3-glucanosyltransferase in complex with laminaribiose [Rhizomucor miehei CAU432],4WTS_A Active-site mutant of Rhizomucor miehei beta-1,3-glucanosyltransferase in complex with laminaritriose [Rhizomucor miehei CAU432]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.54e-25 43 300 31 300
Glucan 1,3-beta-glucosidase BGL2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=BGL2 PE=1 SV=2
3.54e-25 43 300 31 300
Glucan 1,3-beta-glucosidase OS=Candida albicans OX=5476 GN=BGL2 PE=3 SV=1
6.67e-25 46 302 36 298
Glucan 1,3-beta-glucosidase ARB_02797 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02797 PE=1 SV=1
2.97e-22 23 285 380 658
Probable glucan endo-1,3-beta-glucosidase btgC OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=btgC PE=3 SV=1
2.97e-22 23 285 380 658
Probable glucan endo-1,3-beta-glucosidase btgC OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=btgC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000261 0.999701 CS pos: 22-23. Pr: 0.9768

TMHMM  Annotations      help

There is no transmembrane helices in RQM13902.1.