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CAZyme Information: RQM12425.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Peronospora effusa | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Peronospora; Peronospora effusa | |||||||||||
| CAZyme ID | RQM12425.1 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA17 | 394 | 631 | 1.2e-69 | 0.8938775510204081 |
| AA17 | 16 | 265 | 8.7e-51 | 0.9142857142857143 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 185616 | PTZ00436 | 2.18e-05 | 598 | 691 | 239 | 332 | 60S ribosomal protein L19-like protein; Provisional |
| 185616 | PTZ00436 | 6.67e-05 | 598 | 695 | 253 | 350 | 60S ribosomal protein L19-like protein; Provisional |
| 185616 | PTZ00436 | 6.73e-05 | 598 | 691 | 232 | 325 | 60S ribosomal protein L19-like protein; Provisional |
| 185616 | PTZ00436 | 1.61e-04 | 596 | 692 | 216 | 312 | 60S ribosomal protein L19-like protein; Provisional |
| 185616 | PTZ00436 | 0.002 | 598 | 691 | 246 | 339 | 60S ribosomal protein L19-like protein; Provisional |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 800 | 1 | 847 | |
| 1.72e-104 | 391 | 584 | 11 | 204 | |
| 2.80e-100 | 391 | 588 | 17 | 214 | |
| 5.53e-100 | 391 | 588 | 17 | 214 | |
| 5.53e-100 | 391 | 588 | 17 | 214 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.63e-12 | 474 | 571 | 69 | 172 | Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4] |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000266 | 0.999718 | CS pos: 27-28. Pr: 0.9769 |