You are browsing environment: FUNGIDB
CAZyme Information: RQM11069.1
You are here: Home > Sequence: RQM11069.1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Peronospora effusa | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Peronospora; Peronospora effusa | |||||||||||
| CAZyme ID | RQM11069.1 | |||||||||||
| CAZy Family | GH123 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:10 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 2 | 262 | 2e-53 | 0.7415384615384616 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 2.39e-50 | 4 | 263 | 61 | 315 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 227721 | Pgu1 | 5.02e-20 | 2 | 231 | 205 | 448 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 215540 | PLN03010 | 3.10e-18 | 2 | 231 | 145 | 357 | polygalacturonase |
| 177865 | PLN02218 | 2.67e-17 | 2 | 193 | 164 | 355 | polygalacturonase ADPG |
| 215120 | PLN02188 | 1.95e-15 | 2 | 221 | 128 | 347 | polygalacturonase/glycoside hydrolase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 5.04e-185 | 1 | 267 | 1 | 267 | |
| 2.01e-174 | 1 | 249 | 104 | 352 | |
| 2.83e-127 | 2 | 259 | 104 | 358 | |
| 4.02e-127 | 2 | 259 | 104 | 358 | |
| 2.60e-123 | 2 | 259 | 105 | 359 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.73e-41 | 6 | 259 | 88 | 342 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
|
| 4.73e-41 | 6 | 259 | 88 | 342 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
|
| 1.54e-40 | 6 | 259 | 80 | 334 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
|
| 1.87e-38 | 7 | 258 | 87 | 336 | Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
|
| 2.60e-37 | 6 | 258 | 80 | 333 | Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.44e-46 | 6 | 259 | 112 | 366 | Probable endopolygalacturonase I OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pgaI PE=3 SV=1 |
|
| 5.65e-43 | 5 | 258 | 104 | 356 | Polygalacturonase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PGU1 PE=1 SV=1 |
|
| 8.50e-43 | 6 | 259 | 126 | 378 | Endo-polygalacturonase OS=Sclerotinia sclerotiorum OX=5180 GN=PG1 PE=3 SV=1 |
|
| 1.90e-41 | 6 | 258 | 111 | 364 | Probable endopolygalacturonase I OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgaI PE=3 SV=1 |
|
| 1.90e-41 | 6 | 258 | 111 | 364 | Endopolygalacturonase I OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgaI PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.999752 | 0.000264 |