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CAZyme Information: RO3G_16869-t26_1-p1

You are here: Home > Sequence: RO3G_16869-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Rhizopus delemar
Lineage Mucoromycota; Mucoromycetes; ; Rhizopodaceae; Rhizopus; Rhizopus delemar
CAZyme ID RO3G_16869-t26_1-p1
CAZy Family GT71
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
359 CH476754|CGC1 38076.56 9.4777
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_RdelemarRA99-880 17703 246409 244 17459
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in RO3G_16869-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 51 349 3.8e-78 0.9652777777777778

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
215357 PLN02665 1.61e-51 55 343 80 348
pectinesterase family protein
178372 PLN02773 1.24e-45 55 356 17 297
pectinesterase
395871 Pectinesterase 2.38e-45 52 356 9 296
Pectinesterase.
178051 PLN02432 1.85e-42 55 355 23 292
putative pectinesterase
215367 PLN02682 8.39e-42 55 358 82 364
pectinesterase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.20e-62 55 356 91 382
9.09e-61 55 356 1107 1400
9.10e-61 55 356 1132 1425
9.10e-61 55 356 1132 1425
9.10e-61 55 356 1132 1425

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.63e-30 47 328 11 271
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
1.88e-29 47 328 11 271
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1.57e-23 55 328 19 278
Pectin methylesterase from Carrot [Daucus carota]
3.02e-20 55 328 15 274
Chain A, Pectinesterase 1 [Solanum lycopersicum]
1.95e-19 54 350 17 335
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.82e-34 55 358 37 329
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
8.72e-30 47 328 39 299
Probable pectinesterase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pmeA PE=3 SV=1
4.71e-28 55 335 37 307
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
2.84e-27 55 343 76 343
Pectinesterase PPME1 OS=Arabidopsis thaliana OX=3702 GN=PPME1 PE=1 SV=1
2.83e-26 47 328 36 296
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.581738 0.418269

TMHMM  Annotations      help

There is no transmembrane helices in RO3G_16869-t26_1-p1.