CAZyme Information: RO3G_15010-t26_1-p1

Basic Information

• Species: Rhizopus delemar
• Lineage: Mucoromycota; Mucoromycetes; ; Rhizopodaceae; Rhizopus; Rhizopus delemar
• CAZyme ID: RO3G_15010-t26_1-p1
• CAZy Family: GT39
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
858		99864.43	7.9423

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_RdelemarRA99-880	17703	246409	244	17459

• Gene Location: location=CH476746:566424-569097(-)

Full Sequence      

MLPPFLKHDVNSRTSNTEYIPKHRKPSQTHSELLSLELGSVRKKNKYAKKPSPTQSQRSK
WLKFFLVILGLLFLFGYIPFFRFIKDTHQTTVRRYEEVNMVRDQVILYRIIGNDLPPRHK
EGQTLSNLQFILDHEPSFPNTRKIFLLNRIIDPVSEATIIRLLDRYQMEYIRVPFDEAEY
EQLDFQLESFPDPDFLHSDDYRRYSKVAKLRALDYTYHTKNLYAMNNNGGRNTAIQHGKS
IPNAKWIMPFDGNCYLSNNGFKEITSQLEKYGKDTKYFVVPMTRLLNNSVLLNNLDERPK
TPEEPQIIFRHDATEEYNLNMRYGRRSKLELLWRLGALENRRLNRPTVPWEPIERPYSKD
KGNFKNIGWVFRLFSGNPQQEENKKEASSIRAFNRLLAIQSSLDSLDETIARRTFHHDNL
FLYSDKEMSSVRYEFWTKNADVGRTVETLRAAADSILQDSTRRLAPISSATDKEDGMPFE
TVPEKDELGPLSQNVTILTLANYFLGNEKYGRVAANLIRVHFLNEYAVEDEEDYNAARRV
PDDSHLLDFLSDQGYSFPSLSRVPHVVPKYSNHRILNTSDLTKTDVSSLLDCIRILRRMQ
VLTHKEYIDLQAITAEFLEYLVTSPTGIHLAQMTDHRGVLYDLQVTAMAAFTDDVRLFLR
VANRCRMRIGKQFDDQGRQPYEESSTQSRLVASDPNPNVEWRALLHYQTLNLQYWTLLTR
SIQHTAIAKDIWHYTAANGGSISHAVVQHLKRYAQVLDGLSESDARFLCSRLRPLAYMAQ
AAFRPPPAQIQDSLILRRIEQDRAWLEAHVTDFGPLWTTEEEDDVYEHELLKLIQDDKIK
GRLGIPPFWMLSSITPLP

Enzyme Prediction     

No EC number prediction in RO3G_15010-t26_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL38	586	750	5.9e-19	0.5268817204301075

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
398861	Alginate_lyase	4.48e-16	475	746	39	261	Alginate lyase. This family contains several bacterial alginate lyase proteins. Alginate is a family of 1-4-linked copolymers of beta -D-mannuronic acid (M) and alpha -L-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas. Alginate lyases catalyze the depolymerization of alginates by beta -elimination, generating a molecule containing 4-deoxy-L-erythro-hex-4-enepyranosyluronate at the nonreducing end. This family adopts an all alpha fold.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QSB05068.1|PL38	4.32e-87	88	780	384	1056
QBY01811.1|GT0|PL38	2.18e-84	96	755	243	885
AHM03579.1|GT2|PL38	8.67e-79	103	782	241	902
ACF45869.1|PL38	2.99e-77	94	723	547	1164
QPP47941.1|PL38	7.19e-77	98	777	48	700

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3NFV_A	1.20e-06	473	746	76	314	Crystal structure of an alginate lyase (BACOVA_01668) from Bacteroides ovatus at 1.95 A resolution [Bacteroides ovatus ATCC 8483],3NNB_A Crystal structure of an alginate lyase (BACOVA_01668) from Bacteroides ovatus at 1.60 A resolution [Bacteroides ovatus ATCC 8483]

Swiss-Prot Hits     

RO3G_15010-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
0.999807	0.000184

TMHMM  Annotations     

Start	End
64	81