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CAZyme Information: RO3G_10111-t26_1-p1

You are here: Home > Sequence: RO3G_10111-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Rhizopus delemar
Lineage Mucoromycota; Mucoromycetes; ; Rhizopodaceae; Rhizopus; Rhizopus delemar
CAZyme ID RO3G_10111-t26_1-p1
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
339 37326.56 5.2939
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_RdelemarRA99-880 17703 246409 244 17459
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in RO3G_10111-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 31 329 1.5e-72 0.9618055555555556

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395871 Pectinesterase 6.71e-47 31 331 9 298
Pectinesterase.
215357 PLN02665 1.66e-40 21 323 65 348
pectinesterase family protein
178051 PLN02432 1.80e-36 33 335 22 292
putative pectinesterase
178372 PLN02773 1.35e-35 21 323 2 290
pectinesterase
215367 PLN02682 3.64e-35 33 336 81 362
pectinesterase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.85e-52 21 338 77 384
3.34e-47 11 336 14 347
4.45e-47 32 336 434 730
1.82e-45 20 337 1090 1401
1.82e-45 20 337 1115 1426

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.20e-35 34 339 19 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
5.87e-35 34 339 19 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
2.52e-27 33 335 18 308
Pectin methylesterase from Carrot [Daucus carota]
1.23e-24 34 331 18 336
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
2.91e-23 33 331 43 360
Pectin methylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.49e-36 33 339 36 330
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
7.90e-36 7 339 3 329
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
2.03e-34 34 339 47 327
Probable pectinesterase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pmeA PE=3 SV=1
1.96e-33 33 339 43 324
Probable pectinesterase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pmeA PE=3 SV=1
7.51e-32 26 339 36 324
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000374 0.999592 CS pos: 21-22. Pr: 0.9766

TMHMM  Annotations      help

There is no transmembrane helices in RO3G_10111-t26_1-p1.