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CAZyme Information: RO3G_06897-t26_1-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Rhizopus delemar | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Mucoromycota; Mucoromycetes; ; Rhizopodaceae; Rhizopus; Rhizopus delemar | |||||||||||
| CAZyme ID | RO3G_06897-t26_1-p1 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH46 | 2 | 138 | 1.9e-33 | 0.5945945945945946 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 381600 | chitosanase_GH46 | 4.99e-51 | 1 | 138 | 6 | 140 | chitosanase belonging to the glycosyl hydrolase 46 family. This family is composed of the chitosanase enzymes which hydrolyzes chitosan, a biopolymer of beta (1,4)-linked-D-glucosamine (GlcN) residues produced by partial or full deacetylation of chitin. Chitosanases play a role in defense against pathogens such as fungi and are found in microorganisms, fungi, viruses, and plants. Microbial chitosanases can be divided into 3 subclasses based on the specificity of the cleavage positions for partial acetylated chitosan. Subclass I chitosanases such as N174 can split GlcN-GlcN and GlcNAc-GlcN linkages, whereas subclass II chitosanases such as Bacillus sp. no. 7-M can cleave only GlcN-GlcN linkages. Subclass III chitosanases such as MH-K1 chitosanase are the most versatile and can split both GlcN-GlcN and GlcN-GlcNAc linkages. |
| 396099 | Glyco_hydro_46 | 8.25e-36 | 5 | 138 | 2 | 129 | Glycosyl hydrolase family 46. This family are chitosanase enzymes. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 5.07e-59 | 1 | 138 | 94 | 233 | |
| 4.55e-31 | 1 | 138 | 82 | 220 | |
| 1.49e-28 | 2 | 138 | 47 | 177 | |
| 1.49e-28 | 2 | 138 | 47 | 177 | |
| 1.49e-28 | 2 | 138 | 47 | 177 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.35e-30 | 2 | 138 | 11 | 141 | Chain A, Chitosanase [Bacillus subtilis subsp. subtilis str. 168] |
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| 2.62e-29 | 2 | 138 | 11 | 141 | Chain A, Chitosanase [Bacillus subtilis subsp. subtilis str. 168] |
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| 8.81e-16 | 1 | 138 | 10 | 141 | Chain A, chitosanase [Gynuella sunshinyii YC6258],6X2Q_A Chain A, Chitosanase [Gynuella sunshinyii YC6258] |
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| 9.75e-15 | 18 | 138 | 45 | 157 | Abundantly secreted chitosanase from Streptomyces sp. SirexAA-E [Streptomyces sp. SirexAA-E],4ILY_B Abundantly secreted chitosanase from Streptomyces sp. SirexAA-E [Streptomyces sp. SirexAA-E] |
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| 8.47e-13 | 18 | 138 | 32 | 144 | Streptomyces N174 Chitosanase Ph5.5 298k [Streptomyces sp. N174],1CHK_B Streptomyces N174 Chitosanase Ph5.5 298k [Streptomyces sp. N174] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.65e-29 | 2 | 138 | 46 | 176 | Chitosanase OS=Bacillus subtilis (strain 168) OX=224308 GN=csn PE=1 SV=1 |
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| 6.30e-12 | 18 | 138 | 72 | 184 | Chitosanase OS=Streptomyces sp. (strain N174) OX=69019 GN=csn PE=1 SV=1 |
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| 2.14e-10 | 18 | 123 | 73 | 171 | Chitosanase OS=Nocardioides sp. (strain N106) OX=47919 GN=csn PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000063 | 0.000000 |