logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: RO3G_06892-t26_1-p1

You are here: Home > Sequence: RO3G_06892-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Rhizopus delemar
Lineage Mucoromycota; Mucoromycetes; ; Rhizopodaceae; Rhizopus; Rhizopus delemar
CAZyme ID RO3G_06892-t26_1-p1
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
344 39855.20 9.6485
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_RdelemarRA99-880 17703 246409 244 17459
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.-:14

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT50 98 343 6.8e-78 0.8473282442748091

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178434 PLN02841 1.02e-103 1 343 33 376
GPI mannosyltransferase
252941 Mannosyl_trans 7.39e-63 98 343 1 220
Mannosyltransferase (PIG-M). PIG-M has a DXD motif. The DXD motif is found in many glycosyltransferases that utilize nucleotide sugars. It is thought that the motif is involved in the binding of a manganese ion that is required for association of the enzymes with nucleotide sugar substrates.
399599 PIG-U 4.88e-05 15 299 39 305
GPI transamidase subunit PIG-U. Many eukaryotic proteins are anchored to the cell surface via glycosylphosphatidylinositol (GPI), which is posttranslationally attached to the carboxyl-terminus by GPI transamidase. The mammalian GPI transamidase is a complex of at least four subunits, GPI8, GAA1, PIG-S, and PIG-T. PIG-U is thought to represent a fifth subunit in this complex and may be involved in the recognition of either the GPI attachment signal or the lipid portion of GPI.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.83e-149 1 342 33 416
6.57e-98 1 342 36 357
2.98e-96 1 342 36 357
8.88e-95 1 342 29 366
2.72e-90 1 342 39 366

PDB Hits      help

RO3G_06892-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.84e-91 1 342 39 366
GPI mannosyltransferase 1 OS=Xenopus tropicalis OX=8364 GN=pigm PE=2 SV=1
9.78e-89 3 342 45 368
GPI mannosyltransferase 1 OS=Homo sapiens OX=9606 GN=PIGM PE=1 SV=1
9.78e-89 3 342 45 368
GPI mannosyltransferase 1 OS=Pongo abelii OX=9601 GN=PIGM PE=2 SV=1
1.55e-87 1 342 43 368
GPI mannosyltransferase 1 OS=Bos taurus OX=9913 GN=PIGM PE=2 SV=1
6.20e-87 3 342 45 368
GPI mannosyltransferase 1 OS=Macaca fascicularis OX=9541 GN=PIGM PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999325 0.000664

TMHMM  Annotations      download full data without filtering help

Start End
38 60
98 120
132 154
197 219
261 283
303 320