CAZyme Information: RO3G_06888-t26_1-p1

Basic Information

• Species: Rhizopus delemar
• Lineage: Mucoromycota; Mucoromycetes; ; Rhizopodaceae; Rhizopus; Rhizopus delemar
• CAZyme ID: RO3G_06888-t26_1-p1
• CAZy Family: GH28
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
302	CH476736|CGC6	34662.04	10.6478

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_RdelemarRA99-880	17703	246409	244	17459

• Gene Location: location=CH476736:400021-401093(-)

Full Sequence      

MIHKQLVLFITLLVILLCSAVQASEHVALEKRGTKYWKFMNWNKYKKAKVGTTTKWNNKW
HIPKHRGWLWAWKGSEKQNAAYRDPTKKTKDLVLRVKYNAHSRNPEVNPIGGLGFLAEPL
TATKSTKKVTFQYSVYFPKSFKFVKGGKLPGIYGGNGECTGGDESGSCFTSRLMWRDDGE
GEIYAYLPHNKQRSDLCDNKTNICNSDYGYSLGRGKFSFKKGKWVTVKQVIDFNTKNNKN
GRMRLYVNGVKKVDIKKVVIRTTKTPKSIGIMFHTFFGGSDSTWSTPRNQYSYFKNFKLQ
LS

Enzyme Prediction     

EC	4.2.2.26:2

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL14	92	300	7.4e-60	0.965

CDD Domains     

RO3G_06888-t26_1-p1 has no CDD domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CDS05384.1|PL14_3	6.70e-89	37	302	30	289
CDS02791.1|PL14_3	1.71e-86	33	299	24	285
BAL22352.1|PL14|4.2.2.3	1.88e-55	93	301	76	282
AFQ98374.1|PL14	1.68e-51	93	299	60	261
AFQ98373.1|PL14	4.73e-51	93	299	60	261

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5GMT_A	1.09e-44	86	299	51	270	Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai],5GMT_B Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai]
3A0N_A	7.62e-18	93	300	39	241	Crystal structure of D-glucuronic acid-bound alginate lyase vAL-1 from Chlorella virus [Paramecium bursaria Chlorella virus CVK2],3GNE_A Crystal structure of alginate lyase vAL-1 from Chlorella virus [Paramecium bursaria Chlorella virus CVK2],3GNE_B Crystal structure of alginate lyase vAL-1 from Chlorella virus [Paramecium bursaria Chlorella virus CVK2],3IM0_A Crystal structure of Chlorella virus vAL-1 soaked in 200mM D-glucuronic acid, 10% PEG-3350, and 200mM glycine-NaOH (pH 10.0) [Paramecium bursaria Chlorella virus CVK2]
6KCW_A	4.30e-13	108	300	52	238	Structure of alginate lyase Aly36B [Chitinophaga sp. MD30]
6KZK_A	1.70e-11	108	300	52	238	Structure of alginate lyase Aly36B mutant K143A/M171A in complex with alginate trisaccharide [Chitinophaga sp. MD30],6KZK_B Structure of alginate lyase Aly36B mutant K143A/M171A in complex with alginate trisaccharide [Chitinophaga sp. MD30],6KZK_C Structure of alginate lyase Aly36B mutant K143A/M171A in complex with alginate trisaccharide [Chitinophaga sp. MD30]
6KCV_A	4.42e-11	108	300	52	238	Structure of alginate lyase Aly36B mutant K143A/Y185A in complex with alginate tetrasaccharide [Chitinophaga sp. MD30],6KCV_B Structure of alginate lyase Aly36B mutant K143A/Y185A in complex with alginate tetrasaccharide [Chitinophaga sp. MD30],6KCV_C Structure of alginate lyase Aly36B mutant K143A/Y185A in complex with alginate tetrasaccharide [Chitinophaga sp. MD30]

Swiss-Prot Hits     

RO3G_06888-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000232	0.999746	CS pos: 23-24. Pr: 0.9759

TMHMM  Annotations     

Start	End
7	29