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CAZyme Information: RO3G_06255-t26_1-p1

You are here: Home > Sequence: RO3G_06255-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Rhizopus delemar
Lineage Mucoromycota; Mucoromycetes; ; Rhizopodaceae; Rhizopus; Rhizopus delemar
CAZyme ID RO3G_06255-t26_1-p1
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
335 CH476735|CGC6 36336.81 9.7208
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_RdelemarRA99-880 17703 246409 244 17459
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in RO3G_06255-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 29 324 3.9e-76 0.9618055555555556

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
215357 PLN02665 7.45e-50 32 327 80 358
pectinesterase family protein
178372 PLN02773 6.81e-43 32 318 17 290
pectinesterase
178051 PLN02432 4.89e-42 32 331 23 292
putative pectinesterase
395871 Pectinesterase 5.60e-40 29 326 9 297
Pectinesterase.
178276 PLN02671 6.61e-37 34 331 73 357
pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.53e-62 32 332 91 382
1.96e-60 32 332 1168 1461
1.24e-59 17 332 1089 1400
1.24e-59 17 332 1114 1425
1.24e-59 17 332 1114 1425

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.85e-32 19 334 6 298
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
5.85e-32 19 334 6 298
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
1.26e-26 31 328 17 338
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
1.89e-22 32 331 19 308
Pectin methylesterase from Carrot [Daucus carota]
1.27e-21 31 328 17 338
Chain A, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.83e-32 19 333 31 322
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
1.83e-32 19 333 31 322
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
1.41e-31 19 334 34 326
Probable pectinesterase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pmeA PE=3 SV=1
2.58e-31 24 333 36 322
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1
5.75e-30 32 334 37 329
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000196 0.999780 CS pos: 21-22. Pr: 0.9754

TMHMM  Annotations      help

There is no transmembrane helices in RO3G_06255-t26_1-p1.