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CAZyme Information: RO3G_03968-t26_1-p1

You are here: Home > Sequence: RO3G_03968-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Rhizopus delemar
Lineage Mucoromycota; Mucoromycetes; ; Rhizopodaceae; Rhizopus; Rhizopus delemar
CAZyme ID RO3G_03968-t26_1-p1
CAZy Family GH109
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
675 76719.27 4.0877
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_RdelemarRA99-880 17703 246409 244 17459
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in RO3G_03968-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA12 82 477 5.2e-27 0.9750623441396509

CDD Domains      help

RO3G_03968-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.49e-28 95 475 68 458
7.57e-20 72 481 33 468
3.22e-18 72 477 33 464
3.22e-18 72 477 33 464
9.60e-18 151 477 162 506

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.91e-09 90 481 17 404
Native structure of Trichoderma reesei Carbohydrate-Active Enzymes Family AA12 [Trichoderma reesei RUT C-30]
1.91e-09 90 481 16 403
Iodide structure of Trichoderma reesei Carbohydrate-Active Enzymes Family AA12 [Trichoderma reesei RUT C-30]
1.92e-09 90 481 18 405
Calcium structure of Trichoderma reesei Carbohydrate-Active Enzymes Family AA12 [Trichoderma reesei RUT C-30]

Swiss-Prot Hits      help

RO3G_03968-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.168910 0.831071 CS pos: 26-27. Pr: 0.3694

TMHMM  Annotations      help

There is no transmembrane helices in RO3G_03968-t26_1-p1.