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CAZyme Information: RO3G_00379-t26_1-p1

You are here: Home > Sequence: RO3G_00379-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Rhizopus delemar
Lineage Mucoromycota; Mucoromycetes; ; Rhizopodaceae; Rhizopus; Rhizopus delemar
CAZyme ID RO3G_00379-t26_1-p1
CAZy Family AA12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
193 20764.89 4.3729
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_RdelemarRA99-880 17703 246409 244 17459
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in RO3G_00379-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL14 43 182 1.1e-26 0.6947368421052632

CDD Domains      help

RO3G_00379-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.40e-58 7 182 47 241
1.51e-48 8 182 47 240
7.78e-46 13 181 73 264
1.50e-41 5 182 29 224
1.09e-37 7 173 46 230

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.21e-19 34 179 45 208
Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai],5GMT_B Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai]

Swiss-Prot Hits      help

RO3G_00379-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.997967 0.002074

TMHMM  Annotations      help

There is no transmembrane helices in RO3G_00379-t26_1-p1.