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CAZyme Information: RL4_JR_10077-RA-p1

You are here: Home > Sequence: RL4_JR_10077-RA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Raffaelea lauricola
Lineage Ascomycota; Sordariomycetes; ; Ophiostomataceae; Raffaelea; Raffaelea lauricola
CAZyme ID RL4_JR_10077-RA-p1
CAZy Family GT50
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
332 JACBXF010000069|CGC1 35531.06 6.4922
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_RlauricolaRL4 10461 N/A 146 10315
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:45

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 35 329 1.6e-104 0.9900990099009901

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395262 Glyco_hydro_10 1.33e-151 35 329 1 310
Glycosyl hydrolase family 10.
214750 Glyco_10 1.44e-126 78 327 1 263
Glycosyl hydrolase family 10.
226217 XynA 1.51e-76 22 332 17 342
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.02e-182 1 332 1 326
3.91e-181 1 331 1 325
1.77e-180 1 331 1 328
1.63e-171 1 331 1 327
2.58e-171 3 331 4 330

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.76e-149 31 331 2 301
0.89A Ultra high resolution structure of a Thermostable Xylanase from Thermoascus Aurantiacus [Thermoascus aurantiacus],1I1X_A 1.11 A ATOMIC RESOLUTION STRUCTURE OF A THERMOSTABLE XYLANASE FROM THERMOASCUS AURANTIACUS [Thermoascus aurantiacus]
2.50e-149 30 331 1 301
Structural studies on the mobility in the active site of the Thermoascus aurantiacus xylanase I [Thermoascus aurantiacus]
5.04e-149 31 331 2 301
The xylanase TA from Thermoascus aurantiacus utilizes arabinose decorations of xylan as significant substrate specificity determinants. [Thermoascus aurantiacus]
1.44e-148 31 331 2 301
Thermostable xylanase I from Thermoascus aurantiacus- Crystal form II [Thermoascus aurantiacus],1GOM_A Thermostable xylanase I from Thermoascus aurantiacus- Crystal form I [Thermoascus aurantiacus],1GOO_A Thermostable xylanase I from Thermoascus aurantiacus - Cryocooled glycerol complex [Thermoascus aurantiacus],1GOQ_A Thermostable xylanase I from Thermoascus aurantiacus - Room temperature xylobiose complex [Thermoascus aurantiacus],1GOR_A THERMOSTABLE XYLANASE I FROM THERMOASCUS AURANTIACUS - XYLOBIOSE COMPLEX AT 100 K [Thermoascus aurantiacus]
1.56e-147 31 331 2 301
High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus [Thermoascus aurantiacus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.58e-172 3 331 4 330
Endo-1,4-beta-xylanase 2 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=XYL2 PE=3 SV=1
1.51e-156 3 331 4 330
Endo-1,4-beta-xylanase 2 OS=Magnaporthe grisea OX=148305 GN=XYL2 PE=1 SV=1
6.87e-150 15 331 12 327
Endo-1,4-beta-xylanase OS=Thermoascus aurantiacus OX=5087 GN=XYNA PE=1 SV=4
6.10e-147 27 331 20 323
Endo-1,4-beta-xylanase F3 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xynF3 PE=1 SV=1
2.49e-145 26 331 24 329
Endo-1,4-beta-xylanase A OS=Talaromyces purpureogenus OX=1266744 GN=XynA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000247 0.999735 CS pos: 29-30. Pr: 0.3807

TMHMM  Annotations      help

There is no transmembrane helices in RL4_JR_10077-RA-p1.