CAZyme Information: RL4_JR_09875-RA-p1

Basic Information

• Species: Raffaelea lauricola
• Lineage: Ascomycota; Sordariomycetes; ; Ophiostomataceae; Raffaelea; Raffaelea lauricola
• CAZyme ID: RL4_JR_09875-RA-p1
• CAZy Family: GT4
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
815	JACBXF010000136|CGC1	87608.09	4.5972

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_RlauricolaRL4	10461	N/A	146	10315

• Gene Location: location=JACBXF010000136:176276-178829(+)

Full Sequence      

MPSKLLYLTFSALAHIPWTRGQDFSGTSRDAEAFSYVQPLNTTILGQYGHSPAVYPSPEL
TGRGGWEAALVKAKAFLAQLTLEEKANFTTGFPGPCVGNTLPIERLGFPGLCLQDGPLSI
RVADYASVFPAGVTVASSWDRDLLYERGFAMGQEFRAKGAQILLGPVCGPLGRSGFAGRN
WEGFAADPYLTGVAMEKTIVGIQDAGVQATAKHFIANEQETQRNPSYVNGSINFEAISAN
LDDRTMHELYLWPFADAVRAGVASIMCSYNRINGSQACQNSKAQNGLLKEELGFQGYVMS
DWGGTHSGLASVEGGLDMDMPGGLGAYGMVADGHSYFGQNLTLAVNNGTLNESRLNDMVL
RILTPYFWLGQDQGYPSVDPSSADLNTFSPRSTWLREWNLTGEASRDVRADHAAIVRKQA
ASSIVLLKNEAAALPLRAPKSVAVFGNSAGGDTQGFLNQNDFEYGSLSVGGGSGTGRLTY
LVTPLEAVKNRAAKDDALVQYWLNNTLIAKSDVRTLWVPKVPDVCLVFLKSWATEGADRT
TLEIDWDGNEVVESVASVCNNTVVITQSAGINVLPFASHENVTAILAAHYGGQEAGNAIV
DVLYGDVNPSGKLPYTIAHNSTDYNAPPTTAINTTGIEDWQSWFDEGLEIDYRYFDANNI
SVLYEFGHGLSYTTFALGANLTIDTVVSNTNITALPEDLPVQPGGNPALWEALFEVTATV
SNTGSISGQTVPQLYLTFPSSTPSGTPPKQLRGFDKLSVAPGQTRNVTFALLRRDVSYWD
VVSQQWRIPTGDFTVSVGFSSRDLQASATLTALAA

Enzyme Prediction     

EC	3.2.1.-:5	3.2.1.21:4

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	103	321	1.3e-58	0.9814814814814815

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
185053	PRK15098	4.57e-58	127	805	118	758	beta-glucosidase BglX.
396478	Glyco_hydro_3_C	2.64e-54	424	672	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
224389	BglX	1.34e-45	121	455	75	374	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
178629	PLN03080	3.58e-37	72	798	52	769	Probable beta-xylosidase; Provisional
395747	Glyco_hydro_3	5.23e-34	126	364	85	315	Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QMW39247.1|GH3	0.0	3	815	2	815
UDD55000.1|GH3	0.0	3	815	2	815
QMW27177.1|GH3	0.0	3	815	2	815
QRD81533.1|GH3	0.0	3	815	2	815
BAE64040.1|GH3|3.2.1.21	0.0	3	815	2	815

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5JU6_A	1.33e-197	50	810	24	851	Chain A, Beta-glucosidase [Rasamsonia emersonii],5JU6_B Chain B, Beta-glucosidase [Rasamsonia emersonii],5JU6_C Chain C, Beta-glucosidase [Rasamsonia emersonii],5JU6_D Chain D, Beta-glucosidase [Rasamsonia emersonii]
6JXG_A	4.83e-194	62	810	2	710	Crystasl Structure of Beta-glucosidase D2-BGL from Chaetomella Raphigera [Chaetomella raphigera]
5NBS_A	1.84e-191	38	804	10	850	Structural studies of a Glycoside Hydrolase Family 3 beta-glucosidase from the Model Fungus Neurospora crassa [Neurospora crassa OR74A],5NBS_B Structural studies of a Glycoside Hydrolase Family 3 beta-glucosidase from the Model Fungus Neurospora crassa [Neurospora crassa OR74A]
3ZYZ_A	1.16e-189	66	811	9	711	Chain A, Beta-d-glucoside Glucohydrolase [Trichoderma reesei],3ZZ1_A Chain A, BETA-D-GLUCOSIDE GLUCOHYDROLASE [Trichoderma reesei]
4I8D_A	1.19e-189	66	811	10	712	Chain A, Beta-D-glucoside glucohydrolase [Trichoderma reesei],4I8D_B Chain B, Beta-D-glucoside glucohydrolase [Trichoderma reesei]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|A1DC16|BGLG_NEOFI	0.0	3	811	2	811	Probable beta-glucosidase G OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=bglG PE=3 SV=1
sp|Q0CUC1|BGLG_ASPTN	0.0	3	805	2	805	Probable beta-glucosidase G OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=bglG PE=3 SV=1
sp|Q2U325|BGLG_ASPOR	0.0	3	815	2	815	Probable beta-glucosidase G OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=bglG PE=3 SV=1
sp|B8NMR5|BGLG_ASPFN	0.0	3	815	2	815	Probable beta-glucosidase G OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=bglG PE=3 SV=1
sp|Q5B0F4|BGLG_EMENI	0.0	26	811	26	815	Probable beta-glucosidase G OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=bglG PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000263	0.999705	CS pos: 21-22. Pr: 0.9703

TMHMM  Annotations     

There is no transmembrane helices in RL4_JR_09875-RA-p1.