CAZyme Information: RL4_JR_09531-RA-p1

Basic Information

• Species: Raffaelea lauricola
• Lineage: Ascomycota; Sordariomycetes; ; Ophiostomataceae; Raffaelea; Raffaelea lauricola
• CAZyme ID: RL4_JR_09531-RA-p1
• CAZy Family: GT32
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
462	JACBXF010000141|CGC4	54216.17	8.8975

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_RlauricolaRL4	10461	N/A	146	10315

• Gene Location: location=JACBXF010000141:51523-53041(-)

Full Sequence      

MSLSRSPSPTPGGGWSSPGLNIHGSGRSSPSKSYTDSNGGTPVIWESSRSHNSGSSKYPS
FSTQNQGFFTRHMRQLSSSLPRFHTAPRSPAFSDKEKLGRGRWDINNSTLMGRVRLILAR
MGRKLKIRLLIGFVLLLCVYIFYHSPLVYYWRRTAWLGGGEKYVIILAANVGGGVMEWKG
AREWAIERDSTRNKKRYAERWGYDLEIVDMSTKKRYAHEWRESWEKVDFIRHALRKYPKA
EWIWWLDLNTFVMEPTYSLQDHIFNQLQDHIYRDINEYNPLNITHPPGDPYLDELSQSSI
GDGDPNSVNLILSQDCSGFNLGSFFVRKSEWTDRLLDVWWDPVAYEQKHMEWEHKEQDAL
EQLYINQPWIRQQTAFLPQRMINSFPQGACSENGNNTRFHYDQNDRDFLVNMAGCEWGRD
CWGEMYNFRELSYYLNRSLWERFKEDLLAMIWFKITGQKVKF

Enzyme Prediction     

No EC number prediction in RL4_JR_09531-RA-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GT34	162	423	1.5e-86	0.983739837398374

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
368535	Glyco_transf_34	2.16e-77	161	421	3	238	galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologs where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.
215616	PLN03181	0.003	224	339	183	266	glycosyltransferase; Provisional

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CAP69563.1|GT34	1.80e-262	1	461	1	460
CDP23580.1|GT34	1.80e-262	1	461	1	460
VBB72694.1|GT34	1.80e-262	1	461	1	460
AEO65857.1|GT34	2.33e-250	1	462	1	457
AEO54149.1|GT34	8.13e-244	1	461	1	456

PDB Hits     

RL4_JR_09531-RA-p1 has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|P50108|MNN10_YEAST	1.84e-102	150	443	107	390	Probable alpha-1,6-mannosyltransferase MNN10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MNN10 PE=1 SV=1
sp|P78817|YFE6_SCHPO	6.17e-85	128	432	47	334	Uncharacterized alpha-1,2-galactosyltransferase C637.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC637.06 PE=2 SV=2
sp|O94622|YBKD_SCHPO	3.64e-25	188	415	125	333	Uncharacterized alpha-1,2-galactosyltransferase C1289.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC1289.13c PE=3 SV=1
sp|Q09174|GMA12_SCHPO	9.23e-25	192	421	129	339	Alpha-1,2-galactosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gma12 PE=1 SV=1
sp|Q10359|GMH3_SCHPO	9.29e-19	193	388	114	296	Alpha-1,2-galactosyltransferase gmh3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gmh3 PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
0.999999	0.000051

TMHMM  Annotations     

Start	End
129	151