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CAZyme Information: RL4_JR_09321-RA-p1

You are here: Home > Sequence: RL4_JR_09321-RA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Raffaelea lauricola
Lineage Ascomycota; Sordariomycetes; ; Ophiostomataceae; Raffaelea; Raffaelea lauricola
CAZyme ID RL4_JR_09321-RA-p1
CAZy Family GT22
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
340 JACBXF010000071|CGC3 33229.42 8.2964
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_RlauricolaRL4 10461 N/A 146 10315
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in RL4_JR_09321-RA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA16 19 189 2.8e-67 0.9940119760479041

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397269 LPMO_10 1.50e-05 19 189 1 186
Lytic polysaccharide mono-oxygenase, cellulose-degrading. This domain is found associated with a wide variety of cellulose binding domains. This is a family of two very closely related proteins that together act as both a C1- and a C4-oxidising lytic polysaccharide mono-oxygenase, degrading cellulose. This domain is also found in baculoviral spheroidins and spindolins, protein of unknown function.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.10e-74 16 194 17 194
4.39e-71 16 194 17 195
5.38e-70 2 199 3 198
5.38e-70 2 199 3 198
3.51e-69 1 195 1 191

PDB Hits      help

RL4_JR_09321-RA-p1 has no PDB hit.

Swiss-Prot Hits      help

RL4_JR_09321-RA-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000288 0.999690 CS pos: 18-19. Pr: 0.9792

TMHMM  Annotations      help

There is no transmembrane helices in RL4_JR_09321-RA-p1.