CAZyme Information: RL4_JR_09173-RA-p1

Basic Information

• Species: Raffaelea lauricola
• Lineage: Ascomycota; Sordariomycetes; ; Ophiostomataceae; Raffaelea; Raffaelea lauricola
• CAZyme ID: RL4_JR_09173-RA-p1
• CAZy Family: GT2
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1481	JACBXF010000053|CGC1	160164.45	5.5801

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_RlauricolaRL4	10461	N/A	146	10315

• Gene Location: location=JACBXF010000053:660798-665618(-)

Full Sequence      

MAAAKKFYRIGVDVGGTNTDAVILDALESQSADRGVIAQHKTLTTSPNVTDGIEAAVRSV
LEQSQVPPEEAACLTIGTTHFINAVVEHDARRLSKVAIVRLSKSFTKEVPPFSDFPPALR
EIMDGYCTYVDGGLHIDGSEEAPICEDQVVRECAAIRARGIDAVVVAGVFSPIDDRFHQE
QRVSDIIRRELPLADVVCSADVSQLGFLERENASILNASILKFARRTIRGFRAAMKRLHL
HCPLYLTQNDGTLIDAAMAARLPIRTFSSGPTNSMRGAAYLGLPGTSEQTERTATIVIDI
GGTTADVGVLLPSGFPRQASAYVTVAGVKINFGMPHIESIGLGGGSIVRVEKEDGKVTVG
PDSVGHFLTTKGRIFGGNVLTATDVAVAAGENIGDPTYVRDLDQTVVTRTQACIRAMLEA
AIDKMKTSPAPLPVLLVGGGSIVAPAVLDGVTSVICPPFHSVANAVGAAISKVGGTVNDI
QNTLHRSTAQILEDAKATAVERAIAAGALRDTIYIADVDVIPLQYVANQVRVIARAVGEL
SLEGLCQVASHEEDDNSGNEDLLPAESDKAQSKDDPAEAMVAIDPDTYRPTVARKPETGV
QEWLISETDVAWLADGCYVLGCAGGGSPFSDYIRIRDQLRAGHRIRVIDAASLRDDDVIY
WGGHMGSPAVSNERMANDETEQAVTELMEYMGHKKLDAFIDLEIGGGNGLQALTLGSTKY
QDCPAVDADFMGRAYPTYWQTTLCIYEEDCLVPCAIASGNGITILMTKTTNQEIVDRALR
ASCSQMGSRVGMAAKPTTKHAIVNYSVRNTLSLAWRIGRTIARATASNTISTVAEQMIDE
CGGPQAAKVLFRGKIVAVERRLFMGHSYGEITIQQVRASELEDVAAVSLYPAVASGGVLK
IPFKNENIYAQHVADDGTQTYVATVPDLISVIDTQSGRALGVPEFRYGVMVTVIGITCSP
RWTDVPKGLAIGGPSAFGYDIPYKALGTYVEPKSVVKEQLVVCPTAIHSAGTMRCVFHVP
QYASRRITRKSGIAVLASLSLVLLIFTTPHDLAGSAKHIQDLVSAAASGETPNADLATIL
GRLLEQYQPSDVNPPWTNECCGSPRWKWGEEANVTSKLELDPIETLKMRDAHTGFMRAVD
EQLPRYLPSRSAQNRGIVMIGGGKYFPVLMVSLRFLRRTGSKLPVEVFVTTDEYEDDVCE
NVLPTLNAACRMIPTLGAGGQMPKGFQLKVFAALFSSFEEVLILDADSTALRDVEPSFMS
IPFRETGLVTWPDFWQPTLSPLYFLIASQAGATAAAIRRRPSTESGQLLVSKKRHWKTLL
LACYYNYYGPSFYYRLLSQGGAGMGDKDTFLPAAITADLPFYDVRTPVVAVGHRFEDGST
GSRALLQYDVVEDYAATQTLKEWGGGAHNFSTWNATYQHVRPMFLHLSWPKWDATILLDH
ISKWSDMTTGVDGQPEPVFHHPPALAAQVRGAERMLWEEAR

Enzyme Prediction     

No EC number prediction in RL4_JR_09173-RA-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GT71	1155	1389	2e-64	0.9924242424242424

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
399197	DUF917	3.11e-146	608	986	1	350	Protein of unknown function (DUF917). This family consists of hypothetical bacterial and archaeal proteins of unknown function.
223223	HyuA	1.86e-78	8	532	3	547	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit [Amino acid transport and metabolism, Secondary metabolites biosynthesis, transport and catabolism].
226065	COG3535	1.00e-65	603	986	3	355	Uncharacterized conserved protein, DUF917 family [Function unknown].
402574	Mannosyl_trans3	5.37e-62	1155	1373	2	252	Mannosyltransferase putative. This family is conserved in fungi. Several members are annotated as being alpha-1,3-mannosyltransferase but this could not be confirmed.
398834	Hydant_A_N	7.26e-33	9	191	1	176	Hydantoinase/oxoprolinase N-terminal region. This family is found at the N-terminus of the pfam01968 family.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CAK42262.1|GT71	9.88e-79	1083	1439	68	413
QMW28120.1|GT71	6.89e-78	1036	1481	14	440
QRD82589.1|GT71	6.89e-78	1036	1481	14	440
UDD56099.1|GT71	6.89e-78	1036	1481	14	440
QMW40191.1|GT71	2.36e-77	1036	1481	14	440

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6YRA_A	2.22e-16	4	390	2	383	Chain A, 5-oxoprolinase [Pseudomonas jessenii],6YRA_C Chain C, 5-oxoprolinase [Pseudomonas jessenii]
5L9W_B	1.27e-13	10	398	13	405	Crystal structure of the Apc core complex [Aromatoleum aromaticum EbN1]
5M45_B	1.02e-09	10	390	14	398	Structure of Acetone Carboxylase purified from Xanthobacter autotrophicus [Xanthobacter autotrophicus Py2],5M45_E Structure of Acetone Carboxylase purified from Xanthobacter autotrophicus [Xanthobacter autotrophicus Py2],5M45_H Structure of Acetone Carboxylase purified from Xanthobacter autotrophicus [Xanthobacter autotrophicus Py2],5M45_K Structure of Acetone Carboxylase purified from Xanthobacter autotrophicus [Xanthobacter autotrophicus Py2]
5SVC_B	4.01e-09	10	390	24	408	Mechanism of ATP-Dependent Acetone Carboxylation, Acetone Carboxylase nucleotide-free structure [Xanthobacter autotrophicus Py2],5SVC_E Mechanism of ATP-Dependent Acetone Carboxylation, Acetone Carboxylase nucleotide-free structure [Xanthobacter autotrophicus Py2]
5SVB_B	1.82e-07	10	390	24	408	Mechanism of ATP-Dependent Acetone Carboxylation, Acetone Carboxylase AMP bound structure [Xanthobacter autotrophicus Py2],5SVB_E Mechanism of ATP-Dependent Acetone Carboxylation, Acetone Carboxylase AMP bound structure [Xanthobacter autotrophicus Py2]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|A6ZQE9|MNN5_YEAS7	2.90e-51	1026	1402	4	446	Alpha-1,2-mannosyltransferase MNN5 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=MNN5 PE=3 SV=1
sp|P46982|MNN5_YEAST	3.91e-51	1026	1402	4	446	Alpha-1,2-mannosyltransferase MNN5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MNN5 PE=1 SV=2
sp|Q5AD72|MNN24_CANAL	5.01e-49	1118	1364	251	532	Alpha-1,2-mannosyltransferase MNN24 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=MNN24 PE=3 SV=1
sp|P38069|MNN2_YEAST	8.00e-48	1118	1455	137	524	Alpha-1,2-mannosyltransferase MNN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MNN2 PE=1 SV=1
sp|Q59KJ7|MNN21_CANAL	2.93e-46	1111	1393	206	530	Alpha-1,2-mannosyltransferase MNN21 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=MNN21 PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000070	0.000000

TMHMM  Annotations     

There is no transmembrane helices in RL4_JR_09173-RA-p1.