logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: RL4_JR_08972-RA-p1

You are here: Home > Sequence: RL4_JR_08972-RA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Raffaelea lauricola
Lineage Ascomycota; Sordariomycetes; ; Ophiostomataceae; Raffaelea; Raffaelea lauricola
CAZyme ID RL4_JR_08972-RA-p1
CAZy Family GT15
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
480 JACBXF010000053|CGC3 55218.71 6.5052
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_RlauricolaRL4 10461 N/A 146 10315
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.28:32

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH37 16 446 1.1e-142 0.7739307535641547

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395961 Trehalase 0.0 16 447 117 508
Trehalase. Trehalase (EC:3.2.1.28) is known to recycle trehalose to glucose. Trehalose is a physiological hallmark of heat-shock response in yeast and protects of proteins and membranes against a variety of stresses. This family is found in conjunction with pfam07492 in fungi.
224541 TreA 6.83e-150 12 452 157 557
Neutral trehalase [Carbohydrate transport and metabolism].
215307 PLN02567 1.02e-55 16 437 142 534
alpha,alpha-trehalase
183936 treA 7.73e-48 16 437 150 526
alpha,alpha-trehalase TreA.
237326 treA 2.32e-45 16 437 149 526
alpha,alpha-trehalase TreA.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.89e-291 1 479 257 735
1.89e-291 1 479 257 735
1.89e-291 1 479 257 735
7.76e-290 1 479 273 751
1.58e-287 1 479 265 743

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.24e-202 4 460 135 585
Neutral trehalase Nth1 from Saccharomyces cerevisiae in complex with trehalose [Saccharomyces cerevisiae]
7.34e-202 4 460 188 638
Neutral trehalase Nth1 from Saccharomyces cerevisiae [Saccharomyces cerevisiae S288C]
1.62e-200 4 460 283 733
Neutral trehalase Nth1 from Saccharomyces cerevisiae [Saccharomyces cerevisiae]
6.16e-199 4 460 288 738
CRYSTAL STRUCTURE OF THE 14-3-3:NEUTRAL TREHALASE NTH1 COMPLEX [Saccharomyces cerevisiae S288C]
2.40e-35 16 437 153 529
Structure of periplasmic trehalase from Diamondback moth gut bacteria complexed with validoxylamine [Enterobacter cloacae],5Z6H_A Structure of periplasmic trehalase from Diamondback moth gut bacteria in the apo form [Enterobacter cloacae],5Z6H_B Structure of periplasmic trehalase from Diamondback moth gut bacteria in the apo form [Enterobacter cloacae]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.36e-292 1 479 257 735
Cytosolic neutral trehalase OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=NTH1 PE=2 SV=2
4.04e-279 1 468 258 725
Cytosolic neutral trehalase OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=TRE1 PE=3 SV=1
4.59e-275 1 479 264 743
Cytosolic neutral trehalase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=treB PE=2 SV=2
2.30e-265 1 480 262 743
Cytosolic neutral trehalase OS=Beauveria bassiana (strain ARSEF 2860) OX=655819 GN=NTH1 PE=1 SV=1
7.76e-256 4 468 273 737
Cytosolic neutral trehalase OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=treB PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000036 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in RL4_JR_08972-RA-p1.