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CAZyme Information: RL4_JR_08923-RA-p1

You are here: Home > Sequence: RL4_JR_08923-RA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Raffaelea lauricola
Lineage Ascomycota; Sordariomycetes; ; Ophiostomataceae; Raffaelea; Raffaelea lauricola
CAZyme ID RL4_JR_08923-RA-p1
CAZy Family GT15
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
620 67855.53 4.7896
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_RlauricolaRL4 10461 N/A 146 10315
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in RL4_JR_08923-RA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH76 80 503 3.3e-54 0.7849162011173184

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397638 Glyco_hydro_76 6.25e-12 208 502 116 333
Glycosyl hydrolase family 76. Family of alpha-1,6-mannanases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.11e-185 56 616 66 611
5.11e-185 56 616 66 611
5.11e-185 56 616 66 611
5.10e-184 58 616 71 609
5.82e-184 44 616 56 611

PDB Hits      help

RL4_JR_08923-RA-p1 has no PDB hit.

Swiss-Prot Hits      help

RL4_JR_08923-RA-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.905082 0.094919

TMHMM  Annotations      help

There is no transmembrane helices in RL4_JR_08923-RA-p1.