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CAZyme Information: RL4_JR_06643-RA-p1

You are here: Home > Sequence: RL4_JR_06643-RA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Raffaelea lauricola
Lineage Ascomycota; Sordariomycetes; ; Ophiostomataceae; Raffaelea; Raffaelea lauricola
CAZyme ID RL4_JR_06643-RA-p1
CAZy Family GH45
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
722 JACBXF010000155|CGC8 77761.10 6.5915
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_RlauricolaRL4 10461 N/A 146 10315
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in RL4_JR_06643-RA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH154 14 398 5.8e-121 0.9971264367816092

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
401852 DUF2264 1.14e-148 14 399 1 351
Uncharacterized protein conserved in bacteria (DUF2264). Members of this family of hypothetical bacterial proteins have no known function.
226739 COG4289 3.35e-74 3 395 19 363
Uncharacterized protein [Function unknown].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.80e-248 1 721 1 720
1.14e-237 1 721 1 720
4.19e-226 1 706 1 701
2.32e-223 1 709 1 712
4.10e-222 1 704 1 699

PDB Hits      help

RL4_JR_06643-RA-p1 has no PDB hit.

Swiss-Prot Hits      help

RL4_JR_06643-RA-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999181 0.000825

TMHMM  Annotations      help

There is no transmembrane helices in RL4_JR_06643-RA-p1.