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CAZyme Information: RL4_JR_06609-RA-p1

You are here: Home > Sequence: RL4_JR_06609-RA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Raffaelea lauricola
Lineage Ascomycota; Sordariomycetes; ; Ophiostomataceae; Raffaelea; Raffaelea lauricola
CAZyme ID RL4_JR_06609-RA-p1
CAZy Family GH43
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
325 JACBXF010000155|CGC6 35054.44 6.5801
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_RlauricolaRL4 10461 N/A 146 10315
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.72:1 3.2.1.8:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE1 38 219 1.5e-16 0.6123348017621145

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
226040 LpqC 7.49e-39 39 319 44 308
Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport and catabolism].
226584 COG4099 7.68e-08 44 210 176 330
Predicted peptidase [General function prediction only].
223489 DLH 1.08e-06 54 210 23 173
Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism].
402228 Esterase_phd 0.002 43 171 2 126
Esterase PHB depolymerase. This family of proteins include acetyl xylan esterases (AXE), feruloyl esterases (FAE), and poly(3-hydroxybutyrate) (PHB) depolymerases.
223477 YpfH 0.004 129 210 85 161
Predicted esterase [General function prediction only].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.19e-19 45 322 191 455
2.79e-17 26 320 176 460
2.79e-17 26 320 176 460
2.79e-17 26 320 176 460
1.02e-14 42 286 44 285

PDB Hits      help

RL4_JR_06609-RA-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.90e-16 42 285 292 519
Feruloyl esterase B OS=Piromyces equi OX=99929 GN=ESTA PE=2 SV=1
5.36e-09 41 247 42 218
Probable feruloyl esterase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=faeC PE=3 SV=1
3.20e-08 41 247 42 218
Probable feruloyl esterase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=faeC PE=3 SV=2
9.98e-08 59 285 73 264
Bifunctional acetylxylan esterase/xylanase XynS20E OS=Neocallimastix patriciarum OX=4758 GN=xynS20E PE=1 SV=1
3.60e-06 42 213 43 197
Probable feruloyl esterase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=faeC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.011977 0.987997 CS pos: 20-21. Pr: 0.9298

TMHMM  Annotations      help

There is no transmembrane helices in RL4_JR_06609-RA-p1.