CAZyme Information: RL4_JR_06236-RA-p1

Basic Information

• Species: Raffaelea lauricola
• Lineage: Ascomycota; Sordariomycetes; ; Ophiostomataceae; Raffaelea; Raffaelea lauricola
• CAZyme ID: RL4_JR_06236-RA-p1
• CAZy Family: GH37
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
604	JACBXF010000155|CGC10	63519.84	6.0505

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_RlauricolaRL4	10461	N/A	146	10315

• Gene Location: location=JACBXF010000155:416743-418601(-)

Full Sequence      

MQTATMFGKLGVTLAWATAVSAAACAGTYDYIVVGGGTAGVAVASRLSAGLPSASVLLLE
AGPTVWDELKINVPGMKGSTLGTKYDWNFTTVAQADAKGRKFSINRGRVLGGCSAMNLMT
YNRAAAGEYDAWEALGNPGWNWDTMLAAMKKSETFTGINTATYGSAGVGTSGPVQAVINR
YIPEQQLSWIPTLNNLGVATNLESLGGNSLGVMWQPSSIDPATYNRSYSVNAYLPIADHN
LFVLSDVTVAHVDLVDVNGTQHAVGVQLENGTGYRARREVILAAGAVQSPQLLERSGVGA
AAVLKAAGIAQKVDLPGVGENMQDHLRIQTSYRLKSNYTSFDVLRYNATVAADELARWRA
GALSRYDYTGSAYALMTWAQALGTTAAASLTATAKAWLTGNSTNALDAAKLALLADSAVP
QLEVIFSDGYTGTKGYPAASSALYGINTFSLIAVIQHPLSRGTIHINASNPAGAPVIDPH
YLESPYDRQAAALAAQFNRKIAQTAPLSSLWDAEYEPGLDLVKTDADWQQFALNTTLSIF
HPSGTCAMRPRADGGVVDADLVVYGTANLRVVDASIIPLLLSGHVQTAIYGIAEIAAEKI
IAAA

Enzyme Prediction     

No EC number prediction in RL4_JR_06236-RA-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA3	28	601	1.1e-173	0.9929577464788732

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
225186	BetA	5.90e-80	27	589	6	522	Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000	PRK02106	1.50e-71	28	583	5	514	choline dehydrogenase; Validated
398739	GMC_oxred_C	5.50e-37	458	590	1	137	GMC oxidoreductase. This domain found associated with pfam00732.
366272	GMC_oxred_N	4.62e-29	99	326	16	217	GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
215420	PLN02785	1.90e-13	28	324	55	326	Protein HOTHEAD

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UPK92638.1|AA3_2	1.03e-266	29	604	25	597
QKD61481.1|AA3_2	3.45e-262	6	601	1	594
CZS81759.1|AA3_2	3.06e-258	6	604	1	597
CEF78466.1|AA3_2	1.76e-257	6	604	1	597
CEI62186.1|AA3_2	1.01e-256	6	604	1	597

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4YNT_A	3.76e-76	28	600	5	564	Crystal structure of Aspergillus flavus FAD glucose dehydrogenase [Aspergillus flavus NRRL3357],4YNU_A Crystal structure of Aspergillus flavus FADGDH in complex with D-glucono-1,5-lactone [Aspergillus flavus NRRL3357]
6XUT_A	7.46e-65	28	603	16	590	Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina],6XUU_A Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina],6XUV_A Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina]
6O9N_A	2.92e-62	29	601	36	639	Structural insights on a new fungal aryl-alcohol oxidase [Thermothelomyces thermophilus],6O9N_B Structural insights on a new fungal aryl-alcohol oxidase [Thermothelomyces thermophilus]
6ZE2_A	2.01e-58	29	600	6	582	Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE2_B Chain B, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE3_A Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE4_A Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE4_B Chain B, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE5_A Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE5_B Chain B, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE6_A Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE6_B Chain B, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE7_A Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE7_B Chain B, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],7AA2_A Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],7AA2_B Chain B, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495]
5OC1_A	5.41e-55	29	600	2	561	Crystal structure of aryl-alcohol oxidase from Pleurotus eryngii in complex with p-anisic acid [Pleurotus eryngii]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q5GMY3|GMCH_MALSM	9.01e-87	28	601	46	616	GMC oxidoreductase family protein Mala s 12.0101 OS=Malassezia sympodialis OX=76777 PE=1 SV=2
sp|M5EAX2|GMCH_MALS4	9.01e-87	28	601	46	616	GMC oxidoreductase family protein Mala s 12 OS=Malassezia sympodialis (strain ATCC 42132) OX=1230383 GN=MSY001_2108 PE=1 SV=1
sp|A0A142PTM2|CITC_MONPU	3.59e-69	29	600	14	608	Dehydrogenase mpl7 OS=Monascus purpureus OX=5098 GN=mpl7 PE=1 SV=1
sp|A0A161CEV4|CITC_MONRU	3.59e-69	29	600	14	608	Dehydrogenase citC OS=Monascus ruber OX=89489 GN=citC PE=1 SV=1
sp|A0A2H3D1U1|ARMD5_ARMGA	9.26e-65	30	600	41	629	Dehydrogenase ARMGADRAFT_1018426 OS=Armillaria gallica OX=47427 GN=ARMGADRAFT_1018426 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
0.860295	0.139712

TMHMM  Annotations     

There is no transmembrane helices in RL4_JR_06236-RA-p1.