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CAZyme Information: RL4_JR_06216-RA-p1

You are here: Home > Sequence: RL4_JR_06216-RA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Raffaelea lauricola
Lineage Ascomycota; Sordariomycetes; ; Ophiostomataceae; Raffaelea; Raffaelea lauricola
CAZyme ID RL4_JR_06216-RA-p1
CAZy Family GH36
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1181 JACBXF010000155|CGC9 131391.53 6.7923
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_RlauricolaRL4 10461 N/A 146 10315
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in RL4_JR_06216-RA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT90 897 1166 9.3e-65 0.98

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
404385 Methyltransf_23 3.74e-16 104 252 25 161
Methyltransferase domain. This family appears to be a methyltransferase domain.
404528 Methyltransf_25 6.68e-13 105 192 1 97
Methyltransferase domain. This family appears to be a methyltransferase domain.
214773 CAP10 5.14e-10 1063 1166 150 253
Putative lipopolysaccharide-modifying enzyme.
100107 AdoMet_MTases 9.34e-08 104 193 1 99
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).
310354 Glyco_transf_90 8.29e-07 1060 1173 217 332
Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.26e-257 360 1172 11 829
6.17e-250 362 1176 13 831
6.14e-243 360 1172 9 821
2.00e-241 360 1170 11 820
1.16e-240 361 1173 12 823

PDB Hits      help

RL4_JR_06216-RA-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.21e-70 37 335 14 324
Methyltransferase pytC OS=Aspergillus terreus OX=33178 GN=pytC PE=2 SV=1
1.08e-69 37 335 14 324
Methyltransferase pytC OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pytC PE=2 SV=2
1.23e-46 58 334 14 305
Secondary metabolism regulator LAE1 OS=Cochliobolus heterostrophus (strain C5 / ATCC 48332 / race O) OX=701091 GN=LAE1 PE=3 SV=1
3.81e-44 56 334 60 350
Methyltransferase FFUJ_09178 OS=Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831) OX=1279085 GN=FFUJ_09178 PE=2 SV=1
4.46e-39 71 322 43 293
Probable methyltransferase tdiE OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=tdiE PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000058 0.000001

TMHMM  Annotations      download full data without filtering help

Start End
623 645
652 671