CAZyme Information: RL4_JR_06125-RA-p1

Basic Information

• Species: Raffaelea lauricola
• Lineage: Ascomycota; Sordariomycetes; ; Ophiostomataceae; Raffaelea; Raffaelea lauricola
• CAZyme ID: RL4_JR_06125-RA-p1
• CAZy Family: GH31
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
889		100386.56	6.2804

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_RlauricolaRL4	10461	N/A	146	10315

• Gene Location: location=JACBXF010000155:100267-102997(+)

Full Sequence      

MGLSDYYKMHKPKKGQDKAEDGAADTTGATGTTGAAAASLPTVTEKPFRPGEAGALRLSH
LQRPMSSRASSFRTNGSSILLDEIKHEVMVNYLYQQQCSRLWVSDGSGEVEGVLLRKTRG
QYMACPPQLVESPFAVACAALNVRCAMTVNSRVIKTFLQWTPDAVDVPLLNGLRIQILPT
MEDLARARKHQFAAFVASEGLLIVWDDDAMHIVTRAKDIEAELMGLVWRSGNDEEEDEKN
GINFVDYDIDAESGEARTEKRPVHLLNTYLVTLTLILITVSLGAAWRQLAIEVSVDHSYT
RLALVSLLPIQVFFTLFFAQVIFGCLAQIFGPIRQLTVNSKFYSAQRPPRLHSSILPHVT
VQCPVYKEGLAAVIEPTVKSIKQAMSTYELQGGSANMFMNDDGLQLLPDEERRARIEFYA
DHNIGWVARPRDGENGFRRRGKFKKASNMNFALMVSCKVEEKLTAYSRPPTWTQNDEAQA
YERALKEVLEEDGRAWADGNIRVGDYILIIDSDTRVPADCLLDAVSEMEQSPDVGIMQFS
SGVMQVVHNYFENGITFFTNLVYTAIRYTVSNGDVAPFVGHNAVLRWSAIQQVSYMDEDG
YEKFWSESHVSEDFDMSLRLQCDGYIIRMAAWAGDGFKEGVSLTVYDELARWEKYAYGCN
ELLFHPIRMWIYKGPFTPLFRKFLFSNIRFTSKITVISYIGTYYAIAAAWLLTTVNYFIM
GWFNGYLDKYYVDSWKVWFSIIVVFNGLGNVALAVMRYRIGERNLLYSLYENFKWTFLLA
IFLGGLSLHVSQAILAHMFEINMTWGATSKEVEFSNFFIEVPKVLKRFKFSMFFSILAIV
AMIIMAVGSFVPLSWRITDFVAILPMATVSASHLLLPLALNPALMTFSW

Enzyme Prediction     

No EC number prediction in RL4_JR_06125-RA-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GT2	506	718	1.3e-51	0.9847715736040609

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
404513	Glyco_trans_2_3	1.91e-49	506	720	1	194	Glycosyl transferase family group 2. Members of this family of prokaryotic proteins include putative glucosyltransferases, which are involved in bacterial capsule biosynthesis.
224136	BcsA	4.56e-12	504	805	138	426	Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility].
133045	CESA_like	5.48e-10	364	599	4	175	CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan.
133029	GT_2_like_c	4.56e-08	504	633	75	160	Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
133043	CESA_CelA_like	2.60e-07	357	625	1	198	CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AEO64878.1|GT0	0.0	1	889	1	892
VBB84844.1|GT0	0.0	1	889	1	901
CDP31593.1|GT0	0.0	1	889	1	901
QLI69301.1|GT0	0.0	63	889	63	894
QBZ66243.1|GT0	0.0	1	889	1	902

PDB Hits     

RL4_JR_06125-RA-p1 has no PDB hit.

Swiss-Prot Hits     

RL4_JR_06125-RA-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000051	0.000000

TMHMM  Annotations     

Start	End
265	287
302	324
700	722
737	756
777	799
831	853
860	882