CAZyme Information: RL4_JR_06106-RA-p1

Basic Information

• Species: Raffaelea lauricola
• Lineage: Ascomycota; Sordariomycetes; ; Ophiostomataceae; Raffaelea; Raffaelea lauricola
• CAZyme ID: RL4_JR_06106-RA-p1
• CAZy Family: GT90
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
413	JACBXF010000155|CGC5	42836.23	4.4915

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_RlauricolaRL4	10461	N/A	146	10315

• Gene Location: location=JACBXF010000155:37371-38612(+)

Full Sequence      

MRSSVALVAGALAVGASATNFLGFGSGAKMYDNSAKFKADFKAEFETAQNLNGAPGTFNA
VRLYTNIQAYSTNTPIEAFEAAIETKTHILLGIWTSGTTSIQNELDALLAAVKAYGTNFT
DLVIGMSIGSEDLYRDSVTGVQNESGVGAGPDVIINFINTYKKAVANTALASAPIGHVDT
WDAWTNSSNTAVINAVDWLGVDEYPYYQGTVNNSIVNAGTLFDEAYDATVAVAGGKPVWV
TETGWPYSGKVWKEAVPSVENAKYFWDEVGCRKLFGQTTTFWYILRDSDSAQTMKFSITD
NLSTTPRFNLTCPTTFDTPSSTSTSATASSSTSSSSSTATGSLSSQSSSHSATTTSSGSA
ATGVSASSNSSSRSSATASTSAVSTVVSADAPARLSAGVCAVLAVAVGVAALF

Enzyme Prediction     

No EC number prediction in RL4_JR_06106-RA-p1.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
227625	Scw11	1.14e-26	16	271	40	267	Exo-beta-1,3-glucanase, GH17 family [Carbohydrate transport and metabolism].
366033	Glyco_hydro_17	1.87e-07	55	273	37	267	Glycosyl hydrolases family 17.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UNI15929.1|GH17	3.64e-161	1	318	1	319
AEO57324.1|GH17	1.25e-160	1	322	1	323
AEO69666.1|GH17	1.85e-157	1	322	1	323
ATY67306.1|GH17	1.50e-156	1	321	1	323
CDP32718.1|GH17	2.93e-154	3	322	5	324

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4WTP_A	1.22e-16	58	272	59	253	Crystal structure of glycoside hydrolase family 17 beta-1,3-glucanosyltransferase from Rhizomucor miehei [Rhizomucor miehei CAU432]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q4WG16|EGLC_ASPFU	3.40e-100	7	312	6	310	Probable glucan endo-1,3-beta-glucosidase eglC OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=eglC PE=3 SV=1
sp|A2QH21|EGLC_ASPNC	3.66e-100	7	312	6	310	Probable glucan endo-1,3-beta-glucosidase eglC OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=eglC PE=3 SV=2
sp|B0XXF8|EGLC_ASPFC	3.84e-100	7	312	6	310	Probable glucan endo-1,3-beta-glucosidase eglC OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=eglC PE=3 SV=1
sp|A1DJ47|EGLC_NEOFI	3.85e-97	7	312	6	310	Probable glucan endo-1,3-beta-glucosidase eglC OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=eglC PE=3 SV=1
sp|Q5AUT0|EGLC_EMENI	5.99e-97	1	312	1	311	Probable glucan endo-1,3-beta-glucosidase eglC OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=eglC PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000825	0.999145	CS pos: 18-19. Pr: 0.9578

TMHMM  Annotations     

Start	End
5	27