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CAZyme Information: RL4_JR_05406-RA-p1

You are here: Home > Sequence: RL4_JR_05406-RA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Raffaelea lauricola
Lineage Ascomycota; Sordariomycetes; ; Ophiostomataceae; Raffaelea; Raffaelea lauricola
CAZyme ID RL4_JR_05406-RA-p1
CAZy Family GH28
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
738 JACBXF010000142|CGC7 84724.46 6.5146
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_RlauricolaRL4 10461 N/A 146 10315
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.28:32

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH37 145 704 2e-153 0.9938900203665988

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
224541 TreA 0.0 76 710 8 557
Neutral trehalase [Carbohydrate transport and metabolism].
395961 Trehalase 0.0 143 705 1 508
Trehalase. Trehalase (EC:3.2.1.28) is known to recycle trehalose to glucose. Trehalose is a physiological hallmark of heat-shock response in yeast and protects of proteins and membranes against a variety of stresses. This family is found in conjunction with pfam07492 in fungi.
215307 PLN02567 5.41e-51 274 695 142 534
alpha,alpha-trehalase
183934 treF 1.78e-43 274 695 161 536
alpha,alpha-trehalase TreF.
183936 treA 2.08e-40 274 695 150 526
alpha,alpha-trehalase TreA.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 8 737 20 748
0.0 8 737 20 748
0.0 8 737 20 748
0.0 4 737 18 751
0.0 3 737 8 743

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.38e-286 19 730 29 745
Neutral trehalase Nth1 from Saccharomyces cerevisiae [Saccharomyces cerevisiae]
1.76e-283 19 730 34 750
CRYSTAL STRUCTURE OF THE 14-3-3:NEUTRAL TREHALASE NTH1 COMPLEX [Saccharomyces cerevisiae S288C]
6.29e-281 81 730 6 650
Neutral trehalase Nth1 from Saccharomyces cerevisiae [Saccharomyces cerevisiae S288C]
2.98e-258 131 730 3 597
Neutral trehalase Nth1 from Saccharomyces cerevisiae in complex with trehalose [Saccharomyces cerevisiae]
3.18e-32 274 695 153 529
Structure of periplasmic trehalase from Diamondback moth gut bacteria complexed with validoxylamine [Enterobacter cloacae],5Z6H_A Structure of periplasmic trehalase from Diamondback moth gut bacteria in the apo form [Enterobacter cloacae],5Z6H_B Structure of periplasmic trehalase from Diamondback moth gut bacteria in the apo form [Enterobacter cloacae]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
0.0 1 737 1 735
Cytosolic neutral trehalase OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=NTH1 PE=2 SV=2
0.0 8 737 9 743
Cytosolic neutral trehalase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=treB PE=2 SV=2
0.0 10 726 21 737
Cytosolic neutral trehalase OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=treB PE=1 SV=2
0.0 8 738 11 743
Cytosolic neutral trehalase OS=Beauveria bassiana (strain ARSEF 2860) OX=655819 GN=NTH1 PE=1 SV=1
0.0 19 726 20 725
Cytosolic neutral trehalase OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=TRE1 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000047 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in RL4_JR_05406-RA-p1.