logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: RL4_JR_04506-RA-p1

You are here: Home > Sequence: RL4_JR_04506-RA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Raffaelea lauricola
Lineage Ascomycota; Sordariomycetes; ; Ophiostomataceae; Raffaelea; Raffaelea lauricola
CAZyme ID RL4_JR_04506-RA-p1
CAZy Family GH18
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
465 51535.03 4.9032
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_RlauricolaRL4 10461 N/A 146 10315
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in RL4_JR_04506-RA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT62 42 305 5.9e-123 0.9888059701492538

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397491 Anp1 1.56e-158 43 305 1 265
Anp1. The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins co-localize within the cis Golgi, and that they are physically associated in two distinct complexes.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
8.69e-234 22 399 75 452
1.31e-231 2 392 19 410
1.32e-231 24 397 66 439
2.64e-230 22 392 71 441
2.64e-230 22 392 71 441

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.59e-59 44 339 6 302
Crystal structure of Saccharomyces cerevisiae Mnn9 in complex with GDP and Mn. [Saccharomyces cerevisiae S288C]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.37e-165 25 390 37 408
Mannan polymerase II complex ANP1 subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ANP1 PE=1 SV=3
4.67e-158 44 359 77 394
Mannan polymerase II complex anp1 subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=anp1 PE=3 SV=1
5.09e-128 43 355 171 530
Mannan polymerase I complex VAN1 subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VAN1 PE=1 SV=3
1.49e-120 37 355 69 437
Vanadate resistance protein OS=Candida albicans OX=5476 GN=VAN1 PE=3 SV=1
4.05e-60 44 339 73 368
Mannan polymerase complex subunit MNN9 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=MNN9 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.975881 0.024147

TMHMM  Annotations      help

There is no transmembrane helices in RL4_JR_04506-RA-p1.