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CAZyme Information: RL4_JR_03950-RA-p1

You are here: Home > Sequence: RL4_JR_03950-RA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Raffaelea lauricola
Lineage Ascomycota; Sordariomycetes; ; Ophiostomataceae; Raffaelea; Raffaelea lauricola
CAZyme ID RL4_JR_03950-RA-p1
CAZy Family GH140
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
815 JACBXF010000149|CGC7 90216.57 4.5058
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_RlauricolaRL4 10461 N/A 146 10315
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in RL4_JR_03950-RA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 302 578 5e-34 0.35558252427184467

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
407266 Glyco_hydro_106 9.84e-21 183 551 448 873
alpha-L-rhamnosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.06e-208 1 799 130 1014
4.56e-208 1 807 126 1024
2.01e-206 1 799 127 992
1.13e-189 1 800 129 984
3.52e-189 1 800 129 1000

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.46e-06 376 757 754 1061
Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
4.46e-06 376 757 754 1061
Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      help

RL4_JR_03950-RA-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000044 0.000008

TMHMM  Annotations      help

There is no transmembrane helices in RL4_JR_03950-RA-p1.