CAZyme Information: RL4_JR_03833-RA-p1

Basic Information

• Species: Raffaelea lauricola
• Lineage: Ascomycota; Sordariomycetes; ; Ophiostomataceae; Raffaelea; Raffaelea lauricola
• CAZyme ID: RL4_JR_03833-RA-p1
• CAZy Family: GH13
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
667		74223.16	7.2080

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_RlauricolaRL4	10461	N/A	146	10315

• Gene Location: location=JACBXF010000149:3083006-3085125(+)

Full Sequence      

MSLPEEFDIIVCGGGSCGCVVAGRLANLDHNLKVLLIEAGESNLNNPWVFRPGIYPRNMK
LDSKTASFYESRPSKWLAGRKAVVPCANILGGGSSINFMMYTRASASDYDDFQAKGWTTD
ELLPLMKKHETYQRPSHNKDIHGFEGPIKVSFGNYTYPIKDDFLRATESQGIPTVDDLQD
LVTGHGAEQWLKWINRDTGRRSDSAHAYIHATRSVHSNLYLACNTKIDKVLLDGTGRAVA
VQTVPTKPVNPKDVKPRIFKARKQIVVSGGTLSSPLILQRSGIGDPAKLRAAGVKPLVDL
PGVGLNFQDHYLTFSVYRAKPETESFDDFVRGDPEVQKKVFEEWNLKGTGPLATNGIEAG
VKIRPTEAELKEFESWPTPHFKSGWETYFKNKPDKPVMHYSVISGWFGDHMLMPPGKFFT
IFHFLEYPFSRGSTHIQSPDPYENPDFDCGFMNDERDMAPMVWGYIKSRETARRMDAYAG
EVENMHPFFDYDSPARAHDLDLATTKQYALPGNLSAGIGHGSWSSPLPEADVKPKPSTLT
SNRVDKRKDLPYSTRDIHAVEEWVKRHVESTWHSLGTCSMAPREGNSIVKHGVLDERLNV
HGVKGLKVADLSICPDNVGCNTYSTALLIGEKAAVLVAEDLGYSGAALEMKVPTYHAPGE
LRLSYRL

Enzyme Prediction     

EC	1.1.3.13:12

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA3	5	642	1.4e-255	0.9983050847457627

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
235000	PRK02106	7.19e-76	5	659	4	549	choline dehydrogenase; Validated
225186	BetA	1.06e-71	5	640	6	536	Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
366272	GMC_oxred_N	9.96e-43	79	311	16	217	GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
398739	GMC_oxred_C	4.26e-25	428	633	1	143	GMC oxidoreductase. This domain found associated with pfam00732.
215420	PLN02785	3.31e-12	5	630	54	569	Protein HOTHEAD

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UKZ71071.1|AA3_3	0.0	2	667	11	674
UKZ81552.1|AA3_3	0.0	2	667	11	675
UKZ55793.1|AA3_3	0.0	2	667	11	675
QYT00223.1|AA3_3	0.0	2	667	11	675
QGI61599.1|AA3_3	0.0	3	667	14	677

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5HSA_A	0.0	1	655	1	650	Alcohol Oxidase AOX1 from Pichia Pastoris [Komagataella phaffii CBS 7435],5HSA_B Alcohol Oxidase AOX1 from Pichia Pastoris [Komagataella phaffii CBS 7435],5HSA_C Alcohol Oxidase AOX1 from Pichia Pastoris [Komagataella phaffii CBS 7435],5HSA_D Alcohol Oxidase AOX1 from Pichia Pastoris [Komagataella phaffii CBS 7435],5HSA_E Alcohol Oxidase AOX1 from Pichia Pastoris [Komagataella phaffii CBS 7435],5HSA_F Alcohol Oxidase AOX1 from Pichia Pastoris [Komagataella phaffii CBS 7435],5HSA_G Alcohol Oxidase AOX1 from Pichia Pastoris [Komagataella phaffii CBS 7435],5HSA_H Alcohol Oxidase AOX1 from Pichia Pastoris [Komagataella phaffii CBS 7435],5I68_A Chain A, Alcohol oxidase 1 [Komagataella pastoris]
6H3G_A	4.46e-244	1	658	1	634	Chain A, Alcohol oxidase [Phanerodontia chrysosporium],6H3G_B Chain B, Alcohol oxidase [Phanerodontia chrysosporium],6H3G_C Chain C, Alcohol oxidase [Phanerodontia chrysosporium],6H3G_D Chain D, Alcohol oxidase [Phanerodontia chrysosporium],6H3G_E Chain E, Alcohol oxidase [Phanerodontia chrysosporium],6H3G_F Chain F, Alcohol oxidase [Phanerodontia chrysosporium],6H3G_G Chain G, Alcohol oxidase [Phanerodontia chrysosporium],6H3G_H Chain H, Alcohol oxidase [Phanerodontia chrysosporium]
6H3O_A	7.27e-243	1	658	1	634	Chain A, Alcohol oxidase [Phanerodontia chrysosporium],6H3O_B Chain B, Alcohol oxidase [Phanerodontia chrysosporium],6H3O_C Chain C, Alcohol oxidase [Phanerodontia chrysosporium],6H3O_D Chain D, Alcohol oxidase [Phanerodontia chrysosporium],6H3O_E Chain E, Alcohol oxidase [Phanerodontia chrysosporium],6H3O_F Chain F, Alcohol oxidase [Phanerodontia chrysosporium],6H3O_G Chain G, Alcohol oxidase [Phanerodontia chrysosporium],6H3O_H Chain H, Alcohol oxidase [Phanerodontia chrysosporium]
5OC1_A	1.39e-52	6	640	1	564	Crystal structure of aryl-alcohol oxidase from Pleurotus eryngii in complex with p-anisic acid [Pleurotus eryngii]
3FIM_B	6.98e-52	6	640	2	565	Crystal structure of aryl-alcohol-oxidase from Pleurotus eryingii [Pleurotus eryngii]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|F2QY27|ALOX1_KOMPC	0.0	1	655	1	650	Alcohol oxidase 1 OS=Komagataella phaffii (strain ATCC 76273 / CBS 7435 / CECT 11047 / NRRL Y-11430 / Wegner 21-1) OX=981350 GN=AOX1 PE=1 SV=1
sp|P04841|ALOX_PICAN	0.0	1	655	1	651	Alcohol oxidase OS=Pichia angusta OX=870730 GN=MOX PE=1 SV=1
sp|P04842|ALOX1_KOMPG	0.0	1	655	1	650	Alcohol oxidase 1 OS=Komagataella phaffii (strain GS115 / ATCC 20864) OX=644223 GN=AOX1 PE=1 SV=2
sp|F2R038|ALOX2_KOMPC	0.0	1	655	1	650	Alcohol oxidase 2 OS=Komagataella phaffii (strain ATCC 76273 / CBS 7435 / CECT 11047 / NRRL Y-11430 / Wegner 21-1) OX=981350 GN=AOX2 PE=2 SV=1
sp|Q00922|ALOX_CANBO	0.0	1	662	1	662	Alcohol oxidase OS=Candida boidinii OX=5477 GN=AOD1 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000072	0.000000

TMHMM  Annotations     

There is no transmembrane helices in RL4_JR_03833-RA-p1.