CAZyme Information: RL4_JR_03283-RA-p1

Basic Information

• Species: Raffaelea lauricola
• Lineage: Ascomycota; Sordariomycetes; ; Ophiostomataceae; Raffaelea; Raffaelea lauricola
• CAZyme ID: RL4_JR_03283-RA-p1
• CAZy Family: GH106
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
341	JACBXF010000149|CGC4	39199.80	9.2933

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_RlauricolaRL4	10461	N/A	146	10315

• Gene Location: location=JACBXF010000149:1384735-1385839(+)

Full Sequence      

MHFAYPPRKNSNASAFKPRSSRSTLLRPKRLRLLVVIGLFFAGILYLLSRGGNEPNPWMA
THVKDNEGMQAARKHHPTPPPNIATSNFATSRKPTVVLVTVFDETNYHRAYLDLVRENRN
SYAKRHGYGTVFPKVGDYDLNGSPLSWTKVVAMRHALTLFPDSTFFWFLEQDSFILDMDA
TIEDQIMAPEKLEVSMIKDFPVVPPDSIIKTFAHLRGQDVDFLITQDYDGMSTASFIIRN
GQWARFFFETWFDPLYRSYNFQKAETHALEHIVQWHPTILSKMALVPQRTINAYSKNDHG
AKYEPGDMAVRINACMRTSSAICENEAQPYTKLWKRETDII

Enzyme Prediction     

No EC number prediction in RL4_JR_03283-RA-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GT34	93	319	4.4e-69	0.975609756097561

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
368535	Glyco_transf_34	2.32e-77	93	315	2	232	galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologs where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
VBB77835.1|GT34	3.58e-124	1	335	1	307
CBF58113.1|GT34	8.54e-123	1	335	1	318
CAB91762.2|GT34	8.54e-123	1	335	1	318
CDP27323.1|GT34	7.11e-118	1	335	1	302
CAP70731.1|GT34	7.11e-118	1	335	1	302

PDB Hits     

RL4_JR_03283-RA-p1 has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|O13640|YGWH_SCHPO	5.16e-38	96	324	67	300	Uncharacterized alpha-1,2-galactosyltransferase C8D2.17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pi048 PE=3 SV=2
sp|O94622|YBKD_SCHPO	3.91e-33	111	333	123	349	Uncharacterized alpha-1,2-galactosyltransferase C1289.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC1289.13c PE=3 SV=1
sp|Q09174|GMA12_SCHPO	7.27e-30	117	315	129	333	Alpha-1,2-galactosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gma12 PE=1 SV=1
sp|P46985|MNN11_YEAST	7.31e-25	94	335	158	421	Probable alpha-1,6-mannosyltransferase MNN11 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MNN11 PE=1 SV=2
sp|Q10359|GMH3_SCHPO	3.87e-23	117	315	113	314	Alpha-1,2-galactosyltransferase gmh3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gmh3 PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
0.999970	0.000027

TMHMM  Annotations     

Start	End
31	49