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CAZyme Information: RL4_JR_02677-RA-p1

You are here: Home > Sequence: RL4_JR_02677-RA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Raffaelea lauricola
Lineage Ascomycota; Sordariomycetes; ; Ophiostomataceae; Raffaelea; Raffaelea lauricola
CAZyme ID RL4_JR_02677-RA-p1
CAZy Family CE3
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
474 49047.88 5.5647
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_RlauricolaRL4 10461 N/A 146 10315
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.4:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH5 22 314 8.5e-91 0.9893617021276596

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395098 Cellulase 6.78e-59 59 310 28 271
Cellulase (glycosyl hydrolase family 5).
225344 BglC 1.43e-15 63 314 81 370
Aryl-phospho-beta-D-glucosidase BglC, GH1 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.72e-168 16 341 16 341
7.75e-164 1 344 1 344
6.54e-156 23 344 10 330
1.97e-141 14 341 4 330
9.91e-137 8 342 10 343

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.59e-126 19 337 3 325
Chain A, Endoglucanase EG-II [Trichoderma reesei],3QR3_B Chain B, Endoglucanase EG-II [Trichoderma reesei]
1.31e-124 18 337 21 341
Structrue of a lucidum protein [Ganoderma lucidum],5D8W_B Structrue of a lucidum protein [Ganoderma lucidum],5D8Z_A Structrue of a lucidum protein [Ganoderma lucidum],5D8Z_B Structrue of a lucidum protein [Ganoderma lucidum]
2.06e-38 69 324 68 324
Crystal structure of the endo-beta-1,4-glucanase Xac0029 from Xanthomonas axonopodis pv. citri [Xanthomonas citri pv. citri str. 306]
1.12e-35 19 335 22 330
Crystal structure of XacCel5A in the native form [Xanthomonas citri pv. citri str. 306],4W7V_A Crystal structure of XacCel5A in complex with cellobiose [Xanthomonas citri pv. citri str. 306],4W7W_A High-resolution structure of XacCel5A in complex with cellopentaose [Xanthomonas citri pv. citri str. 306]
1.25e-35 19 335 22 330
Crystal structure of the endo-beta-1,4-glucanase (Xac0030) from Xanthomonas axonopodis pv. citri with the triple mutation His174Trp, Tyr211Ala and Lys227Arg. [Xanthomonas citri pv. citri str. 306],5HNN_B Crystal structure of the endo-beta-1,4-glucanase (Xac0030) from Xanthomonas axonopodis pv. citri with the triple mutation His174Trp, Tyr211Ala and Lys227Arg. [Xanthomonas citri pv. citri str. 306],5HNN_C Crystal structure of the endo-beta-1,4-glucanase (Xac0030) from Xanthomonas axonopodis pv. citri with the triple mutation His174Trp, Tyr211Ala and Lys227Arg. [Xanthomonas citri pv. citri str. 306]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.92e-125 16 337 90 415
Endoglucanase EG-II OS=Hypocrea jecorina (strain ATCC 56765 / BCRC 32924 / NRRL 11460 / Rut C-30) OX=1344414 GN=egl2 PE=1 SV=1
7.86e-125 16 337 90 415
Endoglucanase EG-II OS=Hypocrea jecorina OX=51453 GN=egl2 PE=1 SV=1
1.58e-80 23 322 37 325
Endoglucanase 1 OS=Saitozyma flava OX=5416 GN=CMC1 PE=2 SV=1
5.93e-73 23 324 80 371
Manganese dependent endoglucanase Eg5A OS=Phanerodontia chrysosporium OX=2822231 GN=Eg5A PE=1 SV=2
1.40e-36 23 322 119 409
Endoglucanase OS=Ralstonia solanacearum (strain GMI1000) OX=267608 GN=egl PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000238 0.999734 CS pos: 17-18. Pr: 0.9801

TMHMM  Annotations      help

There is no transmembrane helices in RL4_JR_02677-RA-p1.