You are browsing environment: FUNGIDB
CAZyme Information: RL4_JR_02048-RA-p1
You are here: Home > Sequence: RL4_JR_02048-RA-p1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Raffaelea lauricola | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Ophiostomataceae; Raffaelea; Raffaelea lauricola | |||||||||||
| CAZyme ID | RL4_JR_02048-RA-p1 | |||||||||||
| CAZy Family | AA9 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.71:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH162 | 189 | 450 | 3.6e-109 | 0.5351239669421488 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 397972 | Sec15 | 6.41e-145 | 865 | 1165 | 1 | 308 | Exocyst complex subunit Sec15-like. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.43e-221 | 9 | 432 | 8 | 466 | |
| 4.10e-198 | 10 | 432 | 10 | 463 | |
| 5.78e-198 | 10 | 432 | 10 | 463 | |
| 4.55e-197 | 10 | 432 | 10 | 463 | |
| 2.29e-180 | 24 | 448 | 32 | 488 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.29e-199 | 24 | 432 | 11 | 451 | The apo-structure of endo-beta-1,2-glucanase from Talaromyces funiculosus [Talaromyces funiculosus],6IMU_B The apo-structure of endo-beta-1,2-glucanase from Talaromyces funiculosus [Talaromyces funiculosus],6IMV_A The complex structure of endo-beta-1,2-glucanase from Talaromyces funiculosus with sophorose [Talaromyces funiculosus],6IMV_B The complex structure of endo-beta-1,2-glucanase from Talaromyces funiculosus with sophorose [Talaromyces funiculosus] |
|
| 2.05e-198 | 24 | 432 | 11 | 451 | The complex structure of endo-beta-1,2-glucanase mutant (E262Q) from Talaromyces funiculosus with beta-1,2-glucan [Talaromyces funiculosus],6IMW_B The complex structure of endo-beta-1,2-glucanase mutant (E262Q) from Talaromyces funiculosus with beta-1,2-glucan [Talaromyces funiculosus] |
|
| 1.57e-46 | 443 | 1173 | 62 | 875 | Cryo-EM Structure of the Exocyst Complex [Saccharomyces cerevisiae S288C],6VKL_F Negative stain reconstruction of the yeast exocyst octameric complex. [Saccharomyces cerevisiae S288C] |
|
| 3.64e-21 | 819 | 1111 | 2 | 291 | Crystal Structure of Sec15 C-terminal domain [Drosophila melanogaster] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.78e-86 | 435 | 1164 | 17 | 738 | Exocyst complex component sec15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sec15 PE=3 SV=2 |
|
| 1.13e-64 | 447 | 1172 | 18 | 737 | Exocyst complex component 6 OS=Drosophila melanogaster OX=7227 GN=Sec15 PE=1 SV=1 |
|
| 2.68e-64 | 463 | 1177 | 49 | 773 | Exocyst complex component 6 OS=Canis lupus familiaris OX=9615 GN=EXOC6 PE=3 SV=1 |
|
| 6.67e-64 | 463 | 1177 | 49 | 774 | Exocyst complex component 6 OS=Rattus norvegicus OX=10116 GN=Exoc6 PE=1 SV=2 |
|
| 1.21e-63 | 463 | 1177 | 49 | 774 | Exocyst complex component 6 OS=Homo sapiens OX=9606 GN=EXOC6 PE=1 SV=3 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000244 | 0.999732 | CS pos: 18-19. Pr: 0.9351 |