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CAZyme Information: RL4_JR_01130-RA-p1

You are here: Home > Sequence: RL4_JR_01130-RA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Raffaelea lauricola
Lineage Ascomycota; Sordariomycetes; ; Ophiostomataceae; Raffaelea; Raffaelea lauricola
CAZyme ID RL4_JR_01130-RA-p1
CAZy Family PL26
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
466 JACBXF010000169|CGC4 46028.04 4.4459
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_RlauricolaRL4 10461 N/A 146 10315
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in RL4_JR_01130-RA-p1.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227625 Scw11 2.08e-26 15 277 38 271
Exo-beta-1,3-glucanase, GH17 family [Carbohydrate transport and metabolism].
366033 Glyco_hydro_17 1.16e-06 105 315 79 309
Glycosyl hydrolases family 17.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.93e-140 11 321 8 318
5.03e-133 1 317 1 316
9.44e-133 4 321 7 320
4.86e-130 4 320 7 319
4.86e-130 4 320 7 319

PDB Hits      help

RL4_JR_01130-RA-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.47e-133 4 321 3 316
Probable glucan endo-1,3-beta-glucosidase eglC OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=eglC PE=3 SV=2
3.14e-130 20 321 18 316
Probable glucan endo-1,3-beta-glucosidase eglC OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=eglC PE=3 SV=1
4.45e-130 20 388 18 366
Probable glucan endo-1,3-beta-glucosidase eglC OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=eglC PE=3 SV=1
9.60e-130 9 319 8 314
Probable glucan endo-1,3-beta-glucosidase eglC OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=eglC PE=3 SV=1
6.30e-129 20 316 18 311
Probable glucan endo-1,3-beta-glucosidase eglC OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=eglC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000875 0.999100 CS pos: 19-20. Pr: 0.9710

TMHMM  Annotations      download full data without filtering help

Start End
442 464