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CAZyme Information: RAK77715.1

You are here: Home > Sequence: RAK77715.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus fijiensis
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus fijiensis
CAZyme ID RAK77715.1
CAZy Family GH28
CAZyme Description pectin lyase-like protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1679 176751.16 4.6630
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AfijiensisCBS313.89 12336 1448319 318 12018
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC - - - -

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 245 539 1.8e-70 0.9791666666666666
CE8 957 1243 7.2e-62 0.9618055555555556
CE8 601 879 7.1e-61 0.9166666666666666
CE8 5 204 2.6e-16 0.7118055555555556

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178372 PLN02773 5.18e-43 246 547 9 306
pectinesterase
395871 Pectinesterase 4.29e-42 245 541 3 296
Pectinesterase.
178051 PLN02432 9.96e-40 253 546 21 292
putative pectinesterase
215367 PLN02682 2.06e-38 245 546 72 367
pectinesterase family protein
215357 PLN02665 7.69e-37 246 546 72 360
pectinesterase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 53 1299 127 1498
0.0 8 1345 781 2162
0.0 8 1262 846 2169
0.0 8 1351 746 2141
0.0 8 1345 810 2201

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.39e-44 253 547 17 296
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
4.60e-44 253 547 17 296
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
9.53e-29 252 553 16 315
Pectin methylesterase from Carrot [Daucus carota]
4.66e-27 245 554 6 312
Chain A, Pectinesterase 1 [Solanum lycopersicum]
6.06e-12 245 544 7 338
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.97e-48 589 912 24 329
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
3.99e-44 251 519 40 296
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
3.99e-44 251 519 40 296
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
5.56e-44 252 547 42 322
Pectinesterase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pmeA PE=1 SV=1
6.51e-44 253 540 35 326
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999076 0.000957

TMHMM  Annotations      help

There is no transmembrane helices in RAK77715.1.