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CAZyme Information: RAK76984.1

You are here: Home > Sequence: RAK76984.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus fijiensis
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus fijiensis
CAZyme ID RAK76984.1
CAZy Family GH18
CAZyme Description cellobiose dehydrogenase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
549 KZ824645|CGC4 58569.99 6.6192
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AfijiensisCBS313.89 12336 1448319 318 12018
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in RAK76984.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 22 548 1.1e-198 0.9854014598540146

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 6.78e-48 26 549 1 537
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
274888 Rv0697 2.64e-39 34 541 2 482
dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function.
235000 PRK02106 1.90e-22 29 546 2 532
choline dehydrogenase; Validated
366272 GMC_oxred_N 1.51e-20 116 330 26 218
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
398739 GMC_oxred_C 6.16e-18 472 541 79 143
GMC oxidoreductase. This domain found associated with pfam00732.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 549 1 550
1.04e-317 1 549 1 550
1.04e-317 1 549 1 550
1.04e-317 1 549 1 550
3.63e-283 19 549 10 540

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.66e-98 33 547 230 765
Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A]
3.58e-92 33 547 8 544
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
1.51e-90 29 547 4 541
Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium]
2.62e-90 33 547 3 536
Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium]
5.43e-90 33 547 230 766
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.54e-87 29 547 231 768
Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1
1.13e-23 22 541 37 588
Ecdysone oxidase OS=Spodoptera littoralis OX=7109 PE=1 SV=1
3.08e-23 33 546 5 531
Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=betA PE=3 SV=1
5.59e-23 33 543 84 634
Fatty acid photodecarboxylase, chloroplastic OS=Chlorella variabilis OX=554065 GN=FAP PE=1 SV=1
7.34e-23 33 546 5 531
Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.256281 0.743711 CS pos: 24-25. Pr: 0.4846

TMHMM  Annotations      help

There is no transmembrane helices in RAK76984.1.