You are browsing environment: FUNGIDB
CAZyme Information: RAK72210.1
You are here: Home > Sequence: RAK72210.1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Aspergillus fijiensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus fijiensis | |||||||||||
| CAZyme ID | RAK72210.1 | |||||||||||
| CAZy Family | AA3 | |||||||||||
| CAZyme Description | pectin lyase-like protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.171:11 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 63 | 363 | 1.4e-53 | 0.9476923076923077 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 215540 | PLN03010 | 5.29e-19 | 35 | 374 | 48 | 408 | polygalacturonase |
| 215426 | PLN02793 | 1.45e-17 | 110 | 364 | 132 | 411 | Probable polygalacturonase |
| 165802 | PLN02155 | 1.01e-16 | 27 | 365 | 21 | 381 | polygalacturonase |
| 177865 | PLN02218 | 1.89e-16 | 26 | 348 | 60 | 408 | polygalacturonase ADPG |
| 395231 | Glyco_hydro_28 | 4.63e-16 | 140 | 368 | 85 | 321 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 5.08e-183 | 1 | 443 | 5 | 450 | |
| 5.08e-183 | 1 | 443 | 5 | 450 | |
| 7.20e-183 | 11 | 443 | 16 | 450 | |
| 7.20e-183 | 11 | 443 | 16 | 450 | |
| 5.84e-179 | 13 | 439 | 19 | 447 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.99e-143 | 14 | 430 | 1 | 420 | Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus] |
|
| 4.00e-17 | 47 | 361 | 29 | 373 | Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.28e-183 | 11 | 443 | 16 | 450 | Probable rhamnogalacturonase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgC PE=3 SV=1 |
|
| 1.04e-179 | 13 | 439 | 19 | 447 | Probable rhamnogalacturonase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rhgC PE=3 SV=2 |
|
| 2.40e-178 | 13 | 439 | 19 | 447 | Probable rhamnogalacturonase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rhgC PE=3 SV=1 |
|
| 3.75e-143 | 14 | 452 | 18 | 454 | Rhamnogalacturonase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rhgA PE=2 SV=2 |
|
| 1.62e-142 | 14 | 430 | 19 | 439 | Probable rhamnogalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000556 | 0.999409 | CS pos: 13-14. Pr: 0.9523 |