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CAZyme Information: QYA_155087T0-p1

You are here: Home > Sequence: QYA_155087T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Mucor lusitanicus
Lineage Mucoromycota; Mucoromycetes; ; Mucoraceae; Mucor; Mucor lusitanicus
CAZyme ID QYA_155087T0-p1
CAZy Family GT1
CAZyme Description Glycoside hydrolase family 28 protein [Source:UniProtKB/TrEMBL;Acc:A0A168QD04]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
380 McirCBS277-49_SC01|CGC21 39866.51 7.5048
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_MlusitanicusCBS277-49 11852 747725 0 11852
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.-:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 43 372 6.3e-63 0.9723076923076923

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 3.24e-41 121 371 68 316
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
177865 PLN02218 2.40e-40 11 371 52 419
polygalacturonase ADPG
215426 PLN02793 1.08e-38 146 375 192 414
Probable polygalacturonase
215540 PLN03010 3.64e-36 152 375 178 394
polygalacturonase
178580 PLN03003 9.47e-34 29 377 32 382
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.21e-129 1 379 1 381
1.21e-129 1 379 1 381
1.32e-120 9 379 6 379
2.41e-76 47 379 48 395
1.44e-42 47 370 74 423

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.56e-29 47 369 42 373
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]
2.20e-27 64 361 23 331
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
2.20e-27 64 361 23 331
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
4.77e-26 64 361 15 323
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
1.79e-25 52 370 19 331
Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.18e-120 9 379 12 361
Exopolygalacturonase rpg13 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg13 PE=1 SV=1
8.83e-115 47 379 52 383
Exopolygalacturonase rpg16 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg16 PE=1 SV=1
2.32e-114 47 379 52 371
Exopolygalacturonase rpg14 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg14 PE=1 SV=1
2.76e-108 47 379 52 383
Exopolygalacturonase rpg15 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg15 PE=1 SV=1
1.91e-42 47 371 73 423
Exopolygalacturonase X-1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaX-1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000249 0.999744 CS pos: 23-24. Pr: 0.9705

TMHMM  Annotations      help

There is no transmembrane helices in QYA_155087T0-p1.