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CAZyme Information: QRD86711.1

You are here: Home > Sequence: QRD86711.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus flavus
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus flavus
CAZyme ID QRD86711.1
CAZy Family GH13|GH13
CAZyme Description putative rhamnogalacturonase A precursor
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
466 CP044620|CGC24 50519.39 4.1338
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AflavusNRRL3357_2020 13958 N/A 249 13709
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.171:11

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 86 389 3.5e-53 0.9538461538461539

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
177865 PLN02218 1.06e-23 58 373 67 408
polygalacturonase ADPG
178580 PLN03003 8.79e-21 60 390 25 377
Probable polygalacturonase At3g15720
215540 PLN03010 9.12e-21 60 390 48 391
polygalacturonase
395231 Glyco_hydro_28 4.65e-19 166 394 86 321
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
215426 PLN02793 9.67e-19 170 391 182 412
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 466 1 466
0.0 20 466 1 447
0.0 20 466 1 447
0.0 20 466 1 447
0.0 20 466 1 447

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.19e-139 39 457 1 420
Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
0.0 20 466 1 447
Probable rhamnogalacturonase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rhgC PE=3 SV=2
0.0 20 466 1 447
Probable rhamnogalacturonase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rhgC PE=3 SV=1
4.47e-252 28 466 8 446
Probable rhamnogalacturonase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgC PE=3 SV=1
1.99e-143 27 457 8 440
Probable rhamnogalacturonase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rhgA PE=3 SV=1
5.66e-143 27 457 8 440
Probable rhamnogalacturonase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rhgA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.485454 0.514545 CS pos: 42-43. Pr: 0.3771

TMHMM  Annotations      download full data without filtering help

Start End
9 31