CAZyme Information: QRD06949.1

Basic Information

• Species: Parastagonospora nodorum
• Lineage: Ascomycota; Dothideomycetes; ; Phaeosphaeriaceae; Parastagonospora; Parastagonospora nodorum
• CAZyme ID: QRD06949.1
• CAZy Family: GT34
• CAZyme Description: Pectate lyase C [Source:UniProtKB/TrEMBL;Acc:A0A7U2IBU2]

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
402		42149.27	5.7582

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PnodorumSN15	17580	321614	132	17448

• Gene Location: location=CP069043:823127-824335(-)

Full Sequence      

MHILSCLPLLLSSVSALAFPGAEGFGRNAVGGRNGKVYVVNNLNDTGAGSLRDALSQPDR
IIVFSVGGLIKIKDRMVVSKRISILGQTAPGDGITVYGNGWSFSNADDAVVRYIRIRMGK
GGASGKDAITIAEGANMIFDHVSVSWGRDETFSISGSEVGNITIQNSIIGQGLETHSCGG
LMQTNVGQGLSLFRNLYIDNKTRNPKVKGSNDFTNNVVYNWGGGGAYIAGDSEGASEANI
VGNYFVSGPSSSVPAFTRGNANFKAYVESNIYDSDKDGKLGGTTLEASSANYGGVAIQKT
KYAHPAPEKILPASDALMLAVKLVGASLVRDAVDKQLITELQSFGKLGQLMTDENASPMN
GPGTIAGGTSWVDANGNGIPDDVESKFKTVEDWANSLVPSTY

Enzyme Prediction     

No EC number prediction in QRD06949.1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL1	67	245	3.1e-54	0.994535519125683

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
366158	Pec_lyase_C	2.65e-04	71	239	25	209	Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.
226384	PelB	0.007	18	270	30	303	Pectate lyase [Carbohydrate transport and metabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRD06949.1|PL1_2	6.55e-290	1	402	1	402
CBX90811.1|PL1_2	1.14e-235	1	402	1	402
CAE7174273.1|PL1_2	2.84e-215	1	402	1	402
UDD60834.1|PL1_2	1.53e-188	3	402	7	418
QRD90936.1|PL1_2	3.57e-187	3	402	7	418

PDB Hits     

QRD06949.1 has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|B0XMA2|PLYC_ASPFC	8.04e-189	8	402	6	419	Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
sp|Q4WL88|PLYC_ASPFU	2.30e-188	8	402	6	419	Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
sp|B8NQQ7|PLYC_ASPFN	6.33e-188	3	402	7	418	Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
sp|A1DPF0|PLYC_NEOFI	3.08e-186	8	402	6	419	Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
sp|Q2UB83|PLYC_ASPOR	5.99e-186	3	402	7	418	Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000345	0.999614	CS pos: 18-19. Pr: 0.9748

TMHMM  Annotations     

There is no transmembrane helices in QRD06949.1.