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CAZyme Information: QRD06196.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Parastagonospora nodorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Dothideomycetes; ; Phaeosphaeriaceae; Parastagonospora; Parastagonospora nodorum | |||||||||||
| CAZyme ID | QRD06196.1 | |||||||||||
| CAZy Family | GT2 | |||||||||||
| CAZyme Description | Endo-polygalacturonase [Source:UniProtKB/TrEMBL;Acc:A0A7U2NPZ8] | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:80 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 40 | 365 | 3.3e-73 | 0.9661538461538461 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 1.20e-137 | 45 | 365 | 1 | 321 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 177865 | PLN02218 | 7.75e-29 | 82 | 359 | 143 | 420 | polygalacturonase ADPG |
| 227721 | Pgu1 | 4.07e-26 | 87 | 292 | 189 | 408 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 215426 | PLN02793 | 1.68e-25 | 95 | 324 | 143 | 371 | Probable polygalacturonase |
| 178580 | PLN03003 | 4.53e-23 | 29 | 297 | 35 | 304 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 7.05e-232 | 1 | 365 | 1 | 365 | |
| 3.49e-169 | 1 | 365 | 1 | 364 | |
| 1.42e-158 | 8 | 362 | 3 | 357 | |
| 1.42e-158 | 8 | 362 | 3 | 357 | |
| 4.50e-158 | 4 | 365 | 1 | 365 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.94e-156 | 28 | 362 | 1 | 334 | Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini] |
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| 7.63e-143 | 20 | 365 | 1 | 344 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 3.09e-142 | 20 | 365 | 1 | 344 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 4.16e-138 | 28 | 365 | 1 | 336 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 9.26e-125 | 30 | 365 | 3 | 336 | Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.21e-170 | 1 | 365 | 1 | 364 | Polygalacturonase OS=Cochliobolus carbonum OX=5017 GN=PGN1 PE=3 SV=1 |
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| 1.21e-146 | 6 | 365 | 6 | 367 | Polygalacturonase OS=Penicillium digitatum OX=36651 GN=PG1 PE=3 SV=1 |
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| 2.38e-141 | 24 | 365 | 33 | 376 | Polygalacturonase OS=Penicillium griseoroseum OX=84562 GN=PGG1 PE=3 SV=1 |
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| 5.02e-140 | 14 | 362 | 9 | 358 | Endopolygalacturonase 1 OS=Colletotrichum lindemuthianum OX=290576 GN=PG1 PE=3 SV=1 |
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| 3.66e-139 | 30 | 365 | 36 | 370 | Polygalacturonase 1 OS=Penicillium olsonii OX=99116 GN=PG1 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000258 | 0.999746 | CS pos: 27-28. Pr: 0.9233 |