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CAZyme Information: QRD05746.1

You are here: Home > Sequence: QRD05746.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parastagonospora nodorum
Lineage Ascomycota; Dothideomycetes; ; Phaeosphaeriaceae; Parastagonospora; Parastagonospora nodorum
CAZyme ID QRD05746.1
CAZy Family GT1
CAZyme Description pectinesterase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1899 198429.45 8.1674
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PnodorumSN15 17580 321614 132 17448
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC - - - -

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 1144 1433 1.3e-65 0.96875
CE8 426 723 3.7e-65 0.9826388888888888
CE8 783 1062 2.8e-57 0.8993055555555556
CE8 50 330 4.4e-42 0.9861111111111112

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395871 Pectinesterase 8.49e-41 1144 1432 7 294
Pectinesterase.
215367 PLN02682 5.35e-39 421 729 67 367
pectinesterase family protein
178372 PLN02773 4.68e-38 1144 1440 12 297
pectinesterase
178051 PLN02432 6.58e-36 1145 1422 19 275
putative pectinesterase
215367 PLN02682 1.06e-35 1124 1440 56 362
pectinesterase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 1899 1 1899
0.0 121 1458 899 2175
0.0 121 1458 800 2075
0.0 121 1458 863 2140
0.0 121 1458 838 2115

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.87e-35 436 695 19 266
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
1.07e-34 436 695 19 266
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
7.02e-22 426 729 9 308
Pectin methylesterase from Carrot [Daucus carota]
8.14e-20 432 729 11 304
Chain A, Pectinesterase 1 [Solanum lycopersicum]
5.22e-12 436 727 18 338
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.43e-39 771 1101 19 331
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
5.86e-38 428 694 29 290
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
5.86e-38 428 694 29 290
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
7.95e-38 428 694 29 290
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1
3.07e-35 419 730 22 327
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000325 0.999650 CS pos: 15-16. Pr: 0.9656

TMHMM  Annotations      help

There is no transmembrane helices in QRD05746.1.