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CAZyme Information: QRD05477.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Parastagonospora nodorum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Dothideomycetes; ; Phaeosphaeriaceae; Parastagonospora; Parastagonospora nodorum | |||||||||||
| CAZyme ID | QRD05477.1 | |||||||||||
| CAZy Family | GH93 | |||||||||||
| CAZyme Description | Glycoside hydrolase family 28 protein [Source:UniProtKB/TrEMBL;Acc:Q0TYA6] | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:14 | 3.1.1.11:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 132 | 455 | 8.2e-65 | 0.9446153846153846 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 4.66e-100 | 138 | 464 | 1 | 318 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215426 | PLN02793 | 2.87e-24 | 137 | 472 | 79 | 429 | Probable polygalacturonase |
| 177865 | PLN02218 | 4.01e-23 | 174 | 452 | 142 | 411 | polygalacturonase ADPG |
| 227721 | Pgu1 | 1.21e-17 | 53 | 472 | 49 | 476 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 178580 | PLN03003 | 6.80e-17 | 188 | 426 | 110 | 334 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 473 | 1 | 473 | |
| 6.12e-195 | 124 | 472 | 34 | 382 | |
| 4.58e-171 | 123 | 472 | 73 | 443 | |
| 9.08e-147 | 110 | 468 | 22 | 375 | |
| 1.22e-137 | 123 | 464 | 25 | 367 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.54e-114 | 121 | 463 | 1 | 345 | Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
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| 2.14e-85 | 123 | 458 | 11 | 335 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 2.14e-85 | 123 | 458 | 11 | 335 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 9.33e-85 | 123 | 458 | 3 | 327 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 4.06e-84 | 123 | 458 | 3 | 328 | Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.15e-121 | 33 | 462 | 26 | 466 | Probable endopolygalacturonase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaD PE=3 SV=1 |
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| 4.02e-113 | 121 | 463 | 25 | 369 | Polygalacturonase OS=Gibberella fujikuroi OX=5127 GN=PGA PE=1 SV=1 |
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| 4.19e-112 | 123 | 464 | 173 | 512 | Probable endopolygalacturonase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaD PE=3 SV=1 |
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| 9.42e-112 | 33 | 464 | 24 | 493 | Probable endopolygalacturonase D OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaD PE=3 SV=1 |
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| 9.42e-112 | 33 | 464 | 24 | 493 | Endopolygalacturonase D OS=Aspergillus niger OX=5061 GN=pgaD PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000449 | 0.999513 | CS pos: 18-19. Pr: 0.8938 |