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CAZyme Information: QRD05338.1

You are here: Home > Sequence: QRD05338.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parastagonospora nodorum
Lineage Ascomycota; Dothideomycetes; ; Phaeosphaeriaceae; Parastagonospora; Parastagonospora nodorum
CAZyme ID QRD05338.1
CAZy Family GH88
CAZyme Description Lytic polysaccharide monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A7U2NP14]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
424 CP069040|CGC1 43500.88 6.7964
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PnodorumSN15 17580 321614 132 17448
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.14.99.53:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA11 18 220 1.1e-64 0.9685863874345549

CDD Domains      help

QRD05338.1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.09e-257 1 424 1 424
1.64e-108 1 424 1 487
9.06e-69 1 415 1 422
8.94e-57 1 217 1 218
1.28e-56 2 419 7 432

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.32e-47 18 234 1 216
Structure of Aspergillus oryzae AA11 Lytic Polysaccharide Monooxygenase with Zn [Aspergillus oryzae],4MAI_A Structure of Aspergillus oryzae AA11 Lytic Polysaccharide Monooxygenase with Cu(I) [Aspergillus oryzae]

Swiss-Prot Hits      help

QRD05338.1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000617 0.999357 CS pos: 17-18. Pr: 0.9541

TMHMM  Annotations      help

There is no transmembrane helices in QRD05338.1.