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CAZyme Information: QRD04965.1

You are here: Home > Sequence: QRD04965.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parastagonospora nodorum
Lineage Ascomycota; Dothideomycetes; ; Phaeosphaeriaceae; Parastagonospora; Parastagonospora nodorum
CAZyme ID QRD04965.1
CAZy Family GH76
CAZyme Description Phosphomevalonate kinase [Source:UniProtKB/TrEMBL;Acc:A0A7U2FGQ7]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1113 CP069040|CGC3 122121.77 6.7383
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PnodorumSN15 17580 321614 132 17448
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.1.3.-:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA7 284 509 2.4e-40 0.4432314410480349

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
235028 PRK02304 2.57e-34 923 1110 2 173
adenine phosphoribosyltransferase; Provisional
223577 Apt 2.07e-30 924 1107 5 174
Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein [Nucleotide transport and metabolism].
398111 P-mevalo_kinase 6.41e-26 735 853 1 111
Phosphomevalonate kinase. Phosphomevalonate kinase (EC:2.7.4.2) catalyzes the phosphorylation of 5-phosphomevalonate into 5-diphosphomevalonate, an essential step in isoprenoid biosynthesis via the mevalonate pathway. This family represents the animal type of the enzyme. The other is the ERG8 type, found in plants and fungi, and some bacteria (see pfam00288).
396238 FAD_binding_4 9.48e-25 284 426 2 139
FAD binding domain. This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyzes the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyzes the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidizes the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan.
177930 PLN02293 1.76e-20 925 1091 15 170
adenine phosphoribosyltransferase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.31e-14 284 715 64 482
1.75e-14 262 715 36 483
9.39e-14 284 472 62 231
1.24e-13 284 472 62 231
1.24e-13 284 472 62 231

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.80e-22 927 1106 9 177
Crystal structure of an APRT from Yersinia pseudotuberculosis in complex with AMP. [Yersinia pseudotuberculosis IP 32953]
3.27e-22 927 1106 15 183
Crystal structure of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis. [Yersinia pseudotuberculosis IP 32953],5Y07_A Crystal structure of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis with PRPP. [Yersinia pseudotuberculosis IP 32953],5Y07_B Crystal structure of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis with PRPP. [Yersinia pseudotuberculosis IP 32953],5Y4A_A Cadmium directed assembly of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis. [Yersinia pseudotuberculosis IP 32953],5Y4A_B Cadmium directed assembly of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis. [Yersinia pseudotuberculosis IP 32953],5ZC7_A Crystal structure of APRT from Y. pseudotuberculosis with bound adenine (P63 space group). [Yersinia pseudotuberculosis IP 32953],5ZC7_B Crystal structure of APRT from Y. pseudotuberculosis with bound adenine (P63 space group). [Yersinia pseudotuberculosis IP 32953],5ZMI_A Crystal structure of APRT from Y. pseudotuberculosis in complex with adenine. [Yersinia pseudotuberculosis IP 32953],5ZNQ_A Crystal structure of APRT from Y. pseudotuberculosis with bound adenine (P21 space group). [Yersinia pseudotuberculosis IP 32953],5ZNQ_B Crystal structure of APRT from Y. pseudotuberculosis with bound adenine (P21 space group). [Yersinia pseudotuberculosis IP 32953],5ZOC_A Crystal structure of APRT from Y. pseudotuberculosis with bound adenine (C2 space group). [Yersinia pseudotuberculosis IP 32953]
9.69e-20 291 502 47 241
Crystal structure of 6-hydoxy-D-nicotine oxidase from Arthrobacter nicotinovorans. Crystal Form 3 (P1) [Paenarthrobacter nicotinovorans],2BVF_B Crystal structure of 6-hydoxy-D-nicotine oxidase from Arthrobacter nicotinovorans. Crystal Form 3 (P1) [Paenarthrobacter nicotinovorans],2BVG_A Crystal structure of 6-hydoxy-D-nicotine oxidase from Arthrobacter nicotinovorans. Crystal Form 1 (P21) [Paenarthrobacter nicotinovorans],2BVG_B Crystal structure of 6-hydoxy-D-nicotine oxidase from Arthrobacter nicotinovorans. Crystal Form 1 (P21) [Paenarthrobacter nicotinovorans],2BVG_C Crystal structure of 6-hydoxy-D-nicotine oxidase from Arthrobacter nicotinovorans. Crystal Form 1 (P21) [Paenarthrobacter nicotinovorans],2BVG_D Crystal structure of 6-hydoxy-D-nicotine oxidase from Arthrobacter nicotinovorans. Crystal Form 1 (P21) [Paenarthrobacter nicotinovorans],2BVH_A Crystal structure of 6-hydoxy-D-nicotine oxidase from Arthrobacter nicotinovorans. Crystal Form 2 (P21) [Paenarthrobacter nicotinovorans],2BVH_B Crystal structure of 6-hydoxy-D-nicotine oxidase from Arthrobacter nicotinovorans. Crystal Form 2 (P21) [Paenarthrobacter nicotinovorans],2BVH_C Crystal structure of 6-hydoxy-D-nicotine oxidase from Arthrobacter nicotinovorans. Crystal Form 2 (P21) [Paenarthrobacter nicotinovorans],2BVH_D Crystal structure of 6-hydoxy-D-nicotine oxidase from Arthrobacter nicotinovorans. Crystal Form 2 (P21) [Paenarthrobacter nicotinovorans]
4.22e-19 284 727 46 464
The crystal structure of EncM T139V mutant [Streptomyces maritimus],6FYD_B The crystal structure of EncM T139V mutant [Streptomyces maritimus],6FYD_C The crystal structure of EncM T139V mutant [Streptomyces maritimus],6FYD_D The crystal structure of EncM T139V mutant [Streptomyces maritimus]
5.62e-19 284 727 46 464
The crystal structure of EncM V135T mutant [Streptomyces maritimus],6FYG_B The crystal structure of EncM V135T mutant [Streptomyces maritimus],6FYG_C The crystal structure of EncM V135T mutant [Streptomyces maritimus],6FYG_D The crystal structure of EncM V135T mutant [Streptomyces maritimus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.08e-31 286 714 51 439
FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0289697 PE=2 SV=1
6.42e-23 923 1094 5 168
Adenine phosphoribosyltransferase OS=Mastomys natalensis OX=10112 GN=APRT PE=3 SV=1
1.78e-22 927 1099 5 166
Adenine phosphoribosyltransferase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) OX=383372 GN=apt PE=3 SV=1
8.33e-22 927 1085 5 154
Adenine phosphoribosyltransferase OS=Roseiflexus sp. (strain RS-1) OX=357808 GN=apt PE=3 SV=1
1.40e-21 923 1099 5 173
Adenine phosphoribosyltransferase OS=Cricetulus griseus OX=10029 GN=APRT PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000032 0.000017

TMHMM  Annotations      help

There is no transmembrane helices in QRD04965.1.