logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: QRD04907.1

You are here: Home > Sequence: QRD04907.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parastagonospora nodorum
Lineage Ascomycota; Dothideomycetes; ; Phaeosphaeriaceae; Parastagonospora; Parastagonospora nodorum
CAZyme ID QRD04907.1
CAZy Family GH72
CAZyme Description mannan endo-1,6-alpha-mannosidase isoform A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
447 49218.73 4.4541
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PnodorumSN15 17580 321614 132 17448
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in QRD04907.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH76 47 437 3e-85 0.8910614525139665

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397638 Glyco_hydro_76 3.33e-38 161 436 51 348
Glycosyl hydrolase family 76. Family of alpha-1,6-mannanases.
227170 COG4833 4.55e-20 187 441 91 345
Predicted alpha-1,6-mannanase, GH76 family [Carbohydrate transport and metabolism].
395616 Glyco_hydro_9 7.79e-04 166 278 191 290
Glycosyl hydrolase family 9.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 447 1 447
0.0 27 447 61 481
3.91e-142 9 445 9 436
3.64e-131 50 445 93 499
1.12e-102 41 441 27 367

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.19e-24 187 433 90 330
Chain A, Lin0763 protein [Listeria innocua]
4.61e-09 160 443 86 362
Crystal structure of a putative glycosylhydrolase (BT_3782) from Bacteroides thetaiotaomicron VPI-5482 at 1.89 A resolution [Bacteroides thetaiotaomicron VPI-5482],4MU9_B Crystal structure of a putative glycosylhydrolase (BT_3782) from Bacteroides thetaiotaomicron VPI-5482 at 1.89 A resolution [Bacteroides thetaiotaomicron VPI-5482]
2.62e-06 185 355 139 311
Structure of the GH76 alpha-mannanase BT2949 from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],4V1S_B Structure of the GH76 alpha-mannanase BT2949 from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]
8.10e-06 185 355 139 311
Structure of a selenomethionine derivative of the GH76 alpha- mannanase BT2949 Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],4V1R_B Structure of a selenomethionine derivative of the GH76 alpha- mannanase BT2949 Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.84e-18 189 419 122 367
Mannan endo-1,6-alpha-mannosidase DFG5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DFG5 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.006166 0.993801 CS pos: 26-27. Pr: 0.6223

TMHMM  Annotations      help

There is no transmembrane helices in QRD04907.1.