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CAZyme Information: QRD03405.1

You are here: Home > Sequence: QRD03405.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parastagonospora nodorum
Lineage Ascomycota; Dothideomycetes; ; Phaeosphaeriaceae; Parastagonospora; Parastagonospora nodorum
CAZyme ID QRD03405.1
CAZy Family GH5
CAZyme Description Cellobiose dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A7U2FDQ8]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
577 62194.30 6.8758
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PnodorumSN15 17580 321614 132 17448
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.1.99.18:13

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 25 573 7.2e-232 0.9872262773722628

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 1.16e-57 35 572 7 535
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000 PRK02106 1.32e-28 33 571 3 532
choline dehydrogenase; Validated
398739 GMC_oxred_C 8.47e-23 432 566 3 143
GMC oxidoreductase. This domain found associated with pfam00732.
366272 GMC_oxred_N 1.07e-18 116 341 23 216
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
215420 PLN02785 1.07e-11 17 571 38 577
Protein HOTHEAD

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.17e-260 1 573 4 567
1.01e-238 26 574 264 812
1.83e-233 36 573 277 813
4.83e-232 34 573 295 835
7.21e-229 35 573 252 790

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.04e-222 35 573 7 545
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
1.79e-219 35 573 229 767
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
4.92e-219 35 572 229 765
Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A]
2.14e-134 36 573 3 537
Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium]
2.51e-134 36 573 8 542
Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.08e-131 36 573 235 769
Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1
4.64e-23 37 571 4 526
Oxygen-dependent choline dehydrogenase OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=betA PE=3 SV=1
4.66e-22 37 571 4 526
Oxygen-dependent choline dehydrogenase OS=Rhizobium leguminosarum bv. viciae (strain 3841) OX=216596 GN=betA PE=3 SV=1
4.66e-22 37 571 4 526
Oxygen-dependent choline dehydrogenase OS=Brucella anthropi (strain ATCC 49188 / DSM 6882 / CCUG 24695 / JCM 21032 / LMG 3331 / NBRC 15819 / NCTC 12168 / Alc 37) OX=439375 GN=betA PE=3 SV=1
8.27e-22 37 571 4 526
Oxygen-dependent choline dehydrogenase OS=Rhizobium etli (strain CIAT 652) OX=491916 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000699 0.999280 CS pos: 20-21. Pr: 0.9775

TMHMM  Annotations      help

There is no transmembrane helices in QRD03405.1.